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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
LYFQGDYFRLAEKFLREHAKYKRVSRPGNTPRPWFDFSEERLLSRLFEEDELREAVEKED
WENLRDELLDVANFCYLWGKLSV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p06-a1-m2-cB 83 83 1.0000 1.0000 1.0000 2.75e-56 2p06-a1-m1-cB_2p06-a1-m2-cB, 2p06-a1-m2-cA_2p06-a1-m2-cB
2 2p06-a1-m1-cB 83 83 1.0000 1.0000 1.0000 2.75e-56 2p06-a1-m1-cB_2p06-a1-m2-cB
3 2p06-a1-m2-cA 79 78 0.9398 0.9873 1.0000 4.35e-52 2p06-a1-m2-cA_2p06-a1-m2-cB
4 7rmx-a1-m2-cA 229 30 0.1687 0.0611 0.4667 0.25 7rmx-a1-m1-cA_7rmx-a1-m2-cA
5 7rmx-a1-m1-cA 229 30 0.1687 0.0611 0.4667 0.25 7rmx-a1-m1-cA_7rmx-a1-m2-cA
6 2yxh-a1-m1-cB 113 41 0.2169 0.1593 0.4390 4.7 2yxh-a1-m1-cA_2yxh-a1-m1-cB
7 4czu-a2-m1-cB 287 43 0.1446 0.0418 0.2791 4.7 4czu-a2-m1-cB_4czu-a2-m1-cD
8 2yxh-a1-m1-cA 112 41 0.2169 0.1607 0.4390 4.9 2yxh-a1-m1-cA_2yxh-a1-m1-cB
9 4czu-a2-m1-cD 302 43 0.1446 0.0397 0.2791 5.4 4czu-a2-m1-cB_4czu-a2-m1-cD
10 3acz-a1-m1-cD 383 30 0.1205 0.0261 0.3333 5.9 3acz-a1-m1-cD_3acz-a1-m1-cA, 3acz-a1-m1-cD_3acz-a1-m1-cB, 3acz-a1-m1-cD_3acz-a1-m1-cC
11 3acz-a1-m1-cB 385 30 0.1205 0.0260 0.3333 5.9 3acz-a1-m1-cD_3acz-a1-m1-cB
12 3acz-a1-m1-cC 386 30 0.1205 0.0259 0.3333 5.9 3acz-a1-m1-cD_3acz-a1-m1-cC
13 3acz-a1-m1-cA 386 30 0.1205 0.0259 0.3333 5.9 3acz-a1-m1-cD_3acz-a1-m1-cA
14 2zpo-a2-m2-cA 119 16 0.1084 0.0756 0.5625 6.4 2zpo-a2-m1-cA_2zpo-a2-m2-cA
15 2zpo-a2-m1-cA 119 16 0.1084 0.0756 0.5625 6.4 2zpo-a2-m1-cA_2zpo-a2-m2-cA
16 7rw6-a1-m1-cC 642 24 0.1084 0.0140 0.3750 6.9 7rw6-a1-m1-cA_7rw6-a1-m1-cC
17 7rw6-a1-m1-cA 642 24 0.1084 0.0140 0.3750 6.9 7rw6-a1-m1-cA_7rw6-a1-m1-cC
18 4h41-a1-m1-cC 308 43 0.1205 0.0325 0.2326 8.3 4h41-a1-m1-cA_4h41-a1-m1-cC
19 4mhr-a2-m2-cA 280 28 0.1325 0.0393 0.3929 9.2 4mhr-a2-m1-cA_4mhr-a2-m2-cA
20 4mhr-a2-m1-cA 280 28 0.1325 0.0393 0.3929 9.2 4mhr-a2-m1-cA_4mhr-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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