Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=98)
LYFQSLAIRVVAKNQVKPEKVQEFNLCKSLIEETLKEEGCIDYGVYQELENPEILTLEEW
KDEGSLDQHIRSDHFKEIFPLLSECLDKETEINIYRKK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4dpo-a1-m1-cA 99 98 1.0000 0.9899 1.0000 5.95e-68 4dpo-a1-m1-cB_4dpo-a1-m1-cA
2 4dpo-a1-m1-cB 98 98 1.0000 1.0000 1.0000 6.02e-68 4dpo-a1-m1-cB_4dpo-a1-m1-cA
3 1x7v-a7-m3-cA 96 70 0.1939 0.1979 0.2714 6.14e-07 1x7v-a7-m3-cA_1x7v-a7-m1-cC
4 1x7v-a5-m1-cB 96 70 0.1939 0.1979 0.2714 6.14e-07 1x7v-a5-m1-cB_1x7v-a5-m1-cC
5 1x7v-a4-m2-cB 96 70 0.1939 0.1979 0.2714 6.14e-07 1x7v-a4-m2-cA_1x7v-a4-m2-cB
6 1x7v-a4-m2-cA 96 70 0.1939 0.1979 0.2714 6.14e-07 1x7v-a4-m2-cA_1x7v-a4-m2-cB
7 1x7v-a7-m1-cC 97 70 0.1939 0.1959 0.2714 6.82e-07 1x7v-a7-m3-cA_1x7v-a7-m1-cC
8 1x7v-a5-m1-cC 97 70 0.1939 0.1959 0.2714 6.82e-07 1x7v-a5-m1-cB_1x7v-a5-m1-cC
9 4hl9-a4-m1-cH 91 78 0.2347 0.2527 0.2949 8.25e-07 4hl9-a4-m1-cG_4hl9-a4-m1-cH
10 4hl9-a4-m1-cG 91 78 0.2347 0.2527 0.2949 8.25e-07 4hl9-a4-m1-cG_4hl9-a4-m1-cH
11 1y0h-a1-m1-cB 98 88 0.2041 0.2041 0.2273 9.38e-07 1y0h-a1-m1-cB_1y0h-a1-m1-cA
12 1y0h-a1-m1-cA 101 88 0.2041 0.1980 0.2273 9.82e-07 1y0h-a1-m1-cB_1y0h-a1-m1-cA
13 2fb0-a1-m2-cA 91 82 0.2347 0.2527 0.2805 6.50e-06 2fb0-a1-m1-cA_2fb0-a1-m2-cA
14 2fb0-a1-m1-cA 91 82 0.2347 0.2527 0.2805 6.50e-06 2fb0-a1-m1-cA_2fb0-a1-m2-cA
15 2bbe-a2-m4-cA 103 67 0.2245 0.2136 0.3284 5.42e-04 2bbe-a2-m1-cA_2bbe-a2-m4-cA
16 2bbe-a2-m1-cA 103 67 0.2245 0.2136 0.3284 5.42e-04 2bbe-a2-m1-cA_2bbe-a2-m4-cA
17 2bbe-a1-m4-cA 103 67 0.2245 0.2136 0.3284 5.42e-04 2bbe-a1-m3-cA_2bbe-a1-m4-cA
18 2bbe-a1-m3-cA 103 67 0.2245 0.2136 0.3284 5.42e-04 2bbe-a1-m3-cA_2bbe-a1-m4-cA
19 1tuv-a2-m3-cA 103 56 0.1735 0.1650 0.3036 0.004 1tuv-a2-m1-cA_1tuv-a2-m3-cA
20 1tuv-a2-m1-cA 103 56 0.1735 0.1650 0.3036 0.004 1tuv-a2-m1-cA_1tuv-a2-m3-cA
21 1tuv-a1-m2-cA 103 56 0.1735 0.1650 0.3036 0.004 1tuv-a1-m1-cA_1tuv-a1-m2-cA
22 1tuv-a1-m1-cA 103 56 0.1735 0.1650 0.3036 0.004 1tuv-a1-m1-cA_1tuv-a1-m2-cA
23 4zos-a2-m1-cA 105 70 0.1939 0.1810 0.2714 0.005 4zos-a2-m1-cB_4zos-a2-m1-cA
24 3kkf-a2-m6-cA 100 63 0.2245 0.2200 0.3492 0.005 3kkf-a2-m1-cA_3kkf-a2-m6-cA, 3kkf-a2-m3-cA_3kkf-a2-m6-cA
25 3kkf-a2-m3-cA 100 63 0.2245 0.2200 0.3492 0.005 3kkf-a2-m3-cA_3kkf-a2-m6-cA
26 3kkf-a2-m1-cA 100 63 0.2245 0.2200 0.3492 0.005 3kkf-a2-m1-cA_3kkf-a2-m6-cA
27 4zos-a2-m1-cB 97 70 0.1939 0.1959 0.2714 0.006 4zos-a2-m1-cB_4zos-a2-m1-cA
28 3gz7-a1-m1-cB 95 91 0.2041 0.2105 0.2198 0.040 3gz7-a1-m1-cB_3gz7-a1-m1-cA
29 3gz7-a1-m1-cA 96 91 0.2041 0.2083 0.2198 0.041 3gz7-a1-m1-cB_3gz7-a1-m1-cA
30 1q8b-a2-m3-cA 89 54 0.1939 0.2135 0.3519 0.17 1q8b-a2-m1-cA_1q8b-a2-m3-cA
31 1q8b-a2-m1-cA 89 54 0.1939 0.2135 0.3519 0.17 1q8b-a2-m1-cA_1q8b-a2-m3-cA
32 1q8b-a1-m2-cA 89 54 0.1939 0.2135 0.3519 0.17 1q8b-a1-m1-cA_1q8b-a1-m2-cA
33 1q8b-a1-m1-cA 89 54 0.1939 0.2135 0.3519 0.17 1q8b-a1-m1-cA_1q8b-a1-m2-cA
34 7mdi-a1-m1-cD 734 49 0.1531 0.0204 0.3061 0.78 7mdi-a1-m1-cC_7mdi-a1-m1-cD
35 7mdi-a1-m1-cC 734 49 0.1531 0.0204 0.3061 0.78 7mdi-a1-m1-cC_7mdi-a1-m1-cD
36 4b4y-a1-m2-cA 149 42 0.1429 0.0940 0.3333 0.99 4b4y-a1-m1-cA_4b4y-a1-m2-cA
37 4b4y-a1-m1-cA 149 42 0.1429 0.0940 0.3333 0.99 4b4y-a1-m1-cA_4b4y-a1-m2-cA
38 1jym-a1-m1-cD 170 40 0.1122 0.0647 0.2750 1.9 1jym-a1-m1-cD_1jym-a1-m1-cA
39 1jym-a1-m1-cB 176 40 0.1122 0.0625 0.2750 2.1 1jym-a1-m1-cA_1jym-a1-m1-cB
40 1jym-a1-m1-cA 176 40 0.1122 0.0625 0.2750 2.1 1jym-a1-m1-cA_1jym-a1-m1-cB, 1jym-a1-m1-cD_1jym-a1-m1-cA
41 2xi5-a1-m2-cB 184 21 0.1122 0.0598 0.5238 3.6 2xi5-a1-m2-cA_2xi5-a1-m2-cB
42 2xi5-a1-m2-cA 184 21 0.1122 0.0598 0.5238 3.6 2xi5-a1-m2-cA_2xi5-a1-m2-cB
43 2xi7-a1-m2-cD 183 21 0.1122 0.0601 0.5238 3.7 2xi7-a1-m2-cB_2xi7-a1-m2-cD, 2xi7-a1-m2-cC_2xi7-a1-m2-cD
44 2xi7-a1-m2-cC 183 21 0.1122 0.0601 0.5238 3.7 2xi7-a1-m2-cC_2xi7-a1-m2-cD
45 2xi7-a1-m2-cB 183 21 0.1122 0.0601 0.5238 3.7 2xi7-a1-m2-cB_2xi7-a1-m2-cD
46 6fxd-a1-m2-cA 128 18 0.1020 0.0781 0.5556 3.9 6fxd-a1-m1-cA_6fxd-a1-m2-cA, 6fxd-a1-m2-cB_6fxd-a1-m2-cA
47 6fxd-a1-m1-cA 128 18 0.1020 0.0781 0.5556 3.9 6fxd-a1-m1-cA_6fxd-a1-m2-cA
48 6fxd-a1-m2-cB 121 18 0.1020 0.0826 0.5556 4.1 6fxd-a1-m2-cB_6fxd-a1-m2-cA
49 2fk6-a1-m2-cA 307 57 0.1837 0.0586 0.3158 4.7 2fk6-a1-m1-cA_2fk6-a1-m2-cA
50 2fk6-a1-m1-cA 307 57 0.1837 0.0586 0.3158 4.7 2fk6-a1-m1-cA_2fk6-a1-m2-cA
51 3mjd-a2-m1-cD 209 45 0.1633 0.0766 0.3556 7.8 3mjd-a2-m1-cC_3mjd-a2-m1-cD
52 3led-a1-m1-cB 365 20 0.1020 0.0274 0.5000 10.0 3led-a1-m1-cA_3led-a1-m1-cB
53 3led-a1-m1-cA 365 20 0.1020 0.0274 0.5000 10.0 3led-a1-m1-cA_3led-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600