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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MACEGAPEVRIGRKPVMNYVLAILTTLMEQGTNQVVVKARGRNINRAVDAVEIVRKRFAK
NIEIKDIKIDSQEIEVQTPEGQTRTRRVSSIEICLEKAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3u6y-a1-m1-cC 99 99 1.0000 1.0000 1.0000 1.09e-67 3u6y-a1-m1-cA_3u6y-a1-m1-cC
2 3u6y-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.09e-67 3u6y-a1-m1-cA_3u6y-a1-m1-cC
3 1nfj-a1-m4-cA 87 89 0.5051 0.5747 0.5618 4.78e-25 1nfj-a1-m1-cA_1nfj-a1-m4-cA
4 1nfj-a1-m3-cA 87 89 0.5051 0.5747 0.5618 4.78e-25 1nfj-a1-m1-cA_1nfj-a1-m3-cA
5 1nfj-a1-m1-cA 87 89 0.5051 0.5747 0.5618 4.78e-25 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
6 1nfh-a1-m2-cB 86 89 0.5051 0.5814 0.5618 4.81e-25 1nfh-a1-m1-cA_1nfh-a1-m2-cB
7 1nfh-a1-m1-cA 86 89 0.5051 0.5814 0.5618 4.81e-25 1nfh-a1-m1-cA_1nfh-a1-m2-cB
8 2bky-a1-m1-cB 89 90 0.5051 0.5618 0.5556 3.05e-23 2bky-a1-m1-cA_2bky-a1-m1-cB
9 2bky-a1-m1-cA 89 90 0.5051 0.5618 0.5556 3.05e-23 2bky-a1-m1-cA_2bky-a1-m1-cB
10 1h0x-a1-m1-cB 89 90 0.5051 0.5618 0.5556 3.05e-23 1h0x-a1-m1-cA_1h0x-a1-m1-cB
11 1h0x-a1-m1-cA 89 90 0.5051 0.5618 0.5556 3.05e-23 1h0x-a1-m1-cA_1h0x-a1-m1-cB
12 2z7c-a2-m1-cD 92 88 0.4646 0.5000 0.5227 2.31e-22 2z7c-a2-m1-cC_2z7c-a2-m1-cD
13 2z7c-a2-m1-cC 89 90 0.4646 0.5169 0.5111 2.46e-22 2z7c-a2-m1-cC_2z7c-a2-m1-cD
14 3wbm-a1-m1-cC 86 90 0.4848 0.5581 0.5333 5.04e-22 3wbm-a1-m1-cA_3wbm-a1-m1-cC
15 3wbm-a1-m1-cA 86 90 0.4848 0.5581 0.5333 5.04e-22 3wbm-a1-m1-cA_3wbm-a1-m1-cC
16 3toe-a1-m1-cB 86 89 0.4545 0.5233 0.5056 1.56e-18 3toe-a1-m1-cA_3toe-a1-m1-cB
17 3toe-a1-m1-cA 86 89 0.4545 0.5233 0.5056 1.56e-18 3toe-a1-m1-cA_3toe-a1-m1-cB
18 4z9e-a2-m1-cD 85 89 0.3434 0.4000 0.3820 2.98e-17 4z9e-a2-m1-cC_4z9e-a2-m1-cD
19 4z9e-a2-m1-cC 85 89 0.3434 0.4000 0.3820 2.98e-17 4z9e-a2-m1-cC_4z9e-a2-m1-cD
20 2bky-a1-m1-cY 86 85 0.2424 0.2791 0.2824 3.58e-04 2bky-a1-m1-cX_2bky-a1-m1-cY
21 2bky-a1-m1-cX 86 85 0.2424 0.2791 0.2824 3.58e-04 2bky-a1-m1-cX_2bky-a1-m1-cY
22 1udv-a1-m1-cB 86 85 0.2424 0.2791 0.2824 3.58e-04 1udv-a1-m1-cB_1udv-a1-m1-cA
23 1udv-a1-m1-cA 88 85 0.2424 0.2727 0.2824 4.08e-04 1udv-a1-m1-cB_1udv-a1-m1-cA
24 4yd9-a1-m1-cb 1656 49 0.1717 0.0103 0.3469 2.0 4yd9-a1-m1-cA_4yd9-a1-m1-cb
25 4yd9-a1-m1-cA 1656 49 0.1717 0.0103 0.3469 2.0 4yd9-a1-m1-cA_4yd9-a1-m1-cb
26 2f4n-a2-m2-cB 235 56 0.1919 0.0809 0.3393 2.0 2f4n-a2-m2-cB_2f4n-a2-m2-cC
27 2f4n-a2-m1-cB 235 56 0.1919 0.0809 0.3393 2.0 2f4n-a2-m1-cB_2f4n-a2-m2-cC
28 2f4n-a2-m2-cC 235 56 0.1919 0.0809 0.3393 2.1 2f4n-a2-m1-cB_2f4n-a2-m2-cC, 2f4n-a2-m2-cB_2f4n-a2-m2-cC
29 7ag9-a1-m1-cB 384 61 0.1919 0.0495 0.3115 6.1 7ag9-a1-m1-cA_7ag9-a1-m1-cB
30 7z8f-a1-m1-cn 4566 47 0.1414 0.0031 0.2979 6.5 7z8f-a1-m1-cm_7z8f-a1-m1-cn
31 7z8f-a1-m1-cm 4562 47 0.1414 0.0031 0.2979 6.7 7z8f-a1-m1-cm_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cn
32 7z8f-a1-m1-cf 4579 47 0.1414 0.0031 0.2979 6.7 7z8f-a1-m1-ce_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cf
33 7z8f-a1-m1-ce 4579 47 0.1414 0.0031 0.2979 6.7 7z8f-a1-m1-ce_7z8f-a1-m1-cf
34 7ag9-a1-m1-cA 375 61 0.1919 0.0507 0.3115 6.7 7ag9-a1-m1-cA_7ag9-a1-m1-cB
35 5xzo-a1-m1-cB 333 39 0.1212 0.0360 0.3077 9.5 5xzo-a1-m1-cB_5xzo-a1-m1-cA
36 5xzo-a1-m1-cA 335 39 0.1212 0.0358 0.3077 9.5 5xzo-a1-m1-cB_5xzo-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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