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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MADKLKFEIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKMGKGITLSEE
EFGVLLKELGNKLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ltt-a1-m1-cB 74 74 1.0000 1.0000 1.0000 9.12e-49 2ltt-a1-m1-cA_2ltt-a1-m1-cB
2 2ltt-a1-m1-cA 74 74 1.0000 1.0000 1.0000 9.12e-49 2ltt-a1-m1-cA_2ltt-a1-m1-cB
3 3pm7-a1-m1-cA 71 67 0.5541 0.5775 0.6119 2.02e-24 3pm7-a1-m1-cB_3pm7-a1-m1-cA
4 3pm7-a1-m1-cB 68 63 0.5541 0.6029 0.6508 3.34e-24 3pm7-a1-m1-cB_3pm7-a1-m1-cA
5 3obh-a1-m1-cB 65 61 0.5405 0.6154 0.6557 4.64e-22 3obh-a1-m1-cA_3obh-a1-m1-cB
6 3obh-a1-m1-cA 64 61 0.5405 0.6250 0.6557 4.99e-22 3obh-a1-m1-cA_3obh-a1-m1-cB
7 2o9x-a2-m2-cA 160 28 0.1622 0.0750 0.4286 5.5 2o9x-a2-m1-cA_2o9x-a2-m2-cA
8 2o9x-a2-m1-cA 160 28 0.1622 0.0750 0.4286 5.5 2o9x-a2-m1-cA_2o9x-a2-m2-cA
9 3mtj-a2-m2-cA 422 55 0.2432 0.0427 0.3273 9.0 3mtj-a2-m1-cA_3mtj-a2-m2-cA
10 3mtj-a2-m1-cA 422 55 0.2432 0.0427 0.3273 9.0 3mtj-a2-m1-cA_3mtj-a2-m2-cA
11 3mtj-a1-m4-cA 422 55 0.2432 0.0427 0.3273 9.0 3mtj-a1-m1-cA_3mtj-a1-m4-cA
12 3mtj-a1-m1-cA 422 55 0.2432 0.0427 0.3273 9.0 3mtj-a1-m1-cA_3mtj-a1-m4-cA
13 7nfc-a1-m1-cF 3557 21 0.1351 0.0028 0.4762 9.5 7nfc-a1-m1-cF_7nfc-a1-m1-cA
14 7nfc-a1-m1-cA 3562 21 0.1351 0.0028 0.4762 9.5 7nfc-a1-m1-cF_7nfc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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