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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MADVSLFFGGLPAILLKADTIYRIGRQKGLEISIADESMELAHATACILRRGVVRLAALV
GKIFVNDQEETVVDIGMENAVAGKVKLRFGNVEARLEFG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3uv0-a1-m1-cB 99 99 1.0000 1.0000 1.0000 2.27e-67 3uv0-a1-m1-cA_3uv0-a1-m1-cB
2 3uv0-a1-m1-cA 97 97 0.9798 1.0000 1.0000 9.09e-66 3uv0-a1-m1-cA_3uv0-a1-m1-cB
3 6m36-a1-m1-cE 100 19 0.1212 0.1200 0.6316 1.7 6m36-a1-m1-cE_6m36-a1-m1-cG
4 5v4s-a1-m1-cD 387 33 0.1515 0.0388 0.4545 3.0 5v4s-a1-m1-cC_5v4s-a1-m1-cD
5 5v4s-a1-m1-cC 387 33 0.1515 0.0388 0.4545 3.0 5v4s-a1-m1-cC_5v4s-a1-m1-cD
6 5vxb-a4-m1-cC 167 100 0.2929 0.1737 0.2900 3.0 5vxb-a4-m1-cB_5vxb-a4-m1-cC
7 5vxb-a4-m1-cB 167 100 0.2929 0.1737 0.2900 3.0 5vxb-a4-m1-cB_5vxb-a4-m1-cC
8 3a9s-a1-m2-cC 589 47 0.1717 0.0289 0.3617 3.4 3a9s-a1-m1-cB_3a9s-a1-m2-cC, 3a9s-a1-m1-cC_3a9s-a1-m2-cC, 3a9s-a1-m2-cB_3a9s-a1-m2-cC
9 3a9s-a1-m2-cB 589 47 0.1717 0.0289 0.3617 3.4 3a9s-a1-m2-cB_3a9s-a1-m2-cC
10 3a9s-a1-m1-cC 589 47 0.1717 0.0289 0.3617 3.4 3a9s-a1-m1-cC_3a9s-a1-m2-cC
11 3a9s-a1-m1-cB 589 47 0.1717 0.0289 0.3617 3.4 3a9s-a1-m1-cB_3a9s-a1-m2-cC
12 6v6h-a1-m1-cD 503 73 0.2222 0.0437 0.3014 5.0 6v6h-a1-m1-cB_6v6h-a1-m1-cD, 6v6h-a1-m1-cD_6v6h-a1-m1-cA, 6v6h-a1-m1-cD_6v6h-a1-m1-cC
13 4qqw-a5-m1-cC 902 55 0.1616 0.0177 0.2909 5.2 4qqw-a5-m1-cC_4qqw-a5-m1-cA
14 4qqw-a5-m1-cA 911 55 0.1616 0.0176 0.2909 5.2 4qqw-a5-m1-cC_4qqw-a5-m1-cA
15 6v6h-a1-m1-cC 507 24 0.1010 0.0197 0.4167 7.0 6v6h-a1-m1-cD_6v6h-a1-m1-cC
16 6v6h-a1-m1-cB 502 24 0.1010 0.0199 0.4167 7.1 6v6h-a1-m1-cB_6v6h-a1-m1-cD
17 6v6h-a1-m1-cA 507 24 0.1010 0.0197 0.4167 7.3 6v6h-a1-m1-cD_6v6h-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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