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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MAEVEETLKRLQSQKGVQGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDI
DPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPTE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2e8j-a1-m1-cB 96 96 1.0000 1.0000 1.0000 1.17e-67 2e8j-a1-m1-cA_2e8j-a1-m1-cB
2 2e8j-a1-m1-cA 96 96 1.0000 1.0000 1.0000 1.17e-67 2e8j-a1-m1-cA_2e8j-a1-m1-cB
3 7z8f-a1-m1-ct 93 93 0.9688 1.0000 1.0000 3.76e-65 7z8f-a1-m1-cs_7z8f-a1-m1-ct
4 7z8f-a1-m1-cs 93 93 0.9688 1.0000 1.0000 3.76e-65 7z8f-a1-m1-cs_7z8f-a1-m1-ct
5 6f38-a1-m1-cl 93 93 0.9688 1.0000 1.0000 3.76e-65 6f38-a1-m1-ck_6f38-a1-m1-cl
6 6f38-a1-m1-ck 93 93 0.9688 1.0000 1.0000 3.76e-65 6f38-a1-m1-ck_6f38-a1-m1-cl
7 3l9k-a6-m1-cD 95 94 0.7292 0.7368 0.7447 4.56e-48 3l9k-a6-m1-cC_3l9k-a6-m1-cD
8 3l9k-a6-m1-cC 95 94 0.7292 0.7368 0.7447 4.56e-48 3l9k-a6-m1-cC_3l9k-a6-m1-cD
9 7f8f-a1-m2-cA 80 81 0.3646 0.4375 0.4321 2.25e-19 7f8f-a1-m1-cA_7f8f-a1-m2-cA
10 7f8f-a1-m1-cA 80 81 0.3646 0.4375 0.4321 2.25e-19 7f8f-a1-m1-cA_7f8f-a1-m2-cA
11 6hun-a1-m2-cA 428 75 0.1875 0.0421 0.2400 0.76 6hun-a1-m1-cA_6hun-a1-m2-cA
12 6hun-a1-m1-cA 428 75 0.1875 0.0421 0.2400 0.76 6hun-a1-m1-cA_6hun-a1-m2-cA
13 2aco-a1-m1-cA 168 24 0.0833 0.0476 0.3333 3.3 2aco-a1-m1-cB_2aco-a1-m1-cA
14 2aco-a1-m1-cB 166 24 0.0833 0.0482 0.3333 3.3 2aco-a1-m1-cB_2aco-a1-m1-cA
15 1ky9-a1-m6-cA 299 39 0.1146 0.0368 0.2821 9.6 1ky9-a1-m1-cA_1ky9-a1-m6-cA, 1ky9-a1-m5-cA_1ky9-a1-m6-cA
16 1ky9-a1-m5-cA 299 39 0.1146 0.0368 0.2821 9.6 1ky9-a1-m5-cA_1ky9-a1-m6-cA
17 1ky9-a1-m1-cA 299 39 0.1146 0.0368 0.2821 9.6 1ky9-a1-m1-cA_1ky9-a1-m6-cA

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Reference:
Jacob Schwartz et al.

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