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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
MAFDISVNASKTINALVYFSTQQNKLVIRNEVNDTHYTVEFDRDKVVDTFISYNRHNDTI
EIRGVLP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ezu-a1-m2-cA 76 67 1.0000 0.8816 1.0000 1.17e-44 5ezu-a1-m2-cB_5ezu-a1-m2-cA
2 5ezu-a1-m2-cB 67 67 1.0000 1.0000 1.0000 1.47e-44 5ezu-a1-m1-cB_5ezu-a1-m2-cB, 5ezu-a1-m2-cB_5ezu-a1-m2-cA
3 5ezu-a1-m1-cB 67 67 1.0000 1.0000 1.0000 1.47e-44 5ezu-a1-m1-cB_5ezu-a1-m2-cB
4 4cym-a3-m4-cE 165 42 0.1940 0.0788 0.3095 0.53 4cym-a3-m4-cE_4cym-a3-m1-cF
5 4cym-a3-m1-cF 166 42 0.1940 0.0783 0.3095 0.56 4cym-a3-m4-cE_4cym-a3-m1-cF
6 1jmx-a2-m2-cB 339 31 0.1493 0.0295 0.3226 7.0 1jmx-a2-m1-cB_1jmx-a2-m2-cB
7 1jmx-a2-m1-cB 339 31 0.1493 0.0295 0.3226 7.0 1jmx-a2-m1-cB_1jmx-a2-m2-cB
8 4ja8-a1-m1-cB 406 19 0.1194 0.0197 0.4211 9.6 4ja8-a1-m1-cB_4ja8-a1-m1-cA
9 6zjo-a1-m1-cA 265 22 0.1194 0.0302 0.3636 9.9 6zjo-a1-m1-cA_6zjo-a1-m1-cB
10 4ja8-a1-m1-cA 416 19 0.1194 0.0192 0.4211 10.0 4ja8-a1-m1-cB_4ja8-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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