Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MAKEFGIPAAVAGTVLNVVEAGGWVTTIVSILTAVGSGGLSLLAAAGRESIKAYLKKEIK
KKGKRAVIAW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1o84-a1-m2-cB 70 70 1.0000 1.0000 1.0000 1.71e-42 1o84-a1-m1-cA_1o84-a1-m2-cB, 1o84-a1-m1-cB_1o84-a1-m2-cB, 1o84-a1-m2-cA_1o84-a1-m2-cB
2 1o84-a1-m2-cA 70 70 1.0000 1.0000 1.0000 1.71e-42 1o84-a1-m2-cA_1o84-a1-m2-cB
3 1o84-a1-m1-cB 70 70 1.0000 1.0000 1.0000 1.71e-42 1o84-a1-m1-cB_1o84-a1-m2-cB
4 1o84-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.71e-42 1o84-a1-m1-cA_1o84-a1-m2-cB
5 4rgd-a1-m1-cB 70 70 0.9714 0.9714 0.9714 2.46e-40 4rgd-a1-m1-cA_4rgd-a1-m1-cB
6 4rgd-a1-m1-cA 70 70 0.9714 0.9714 0.9714 2.46e-40 4rgd-a1-m1-cA_4rgd-a1-m1-cB
7 1xzp-a2-m2-cB 131 49 0.1857 0.0992 0.2653 3.5 1xzp-a2-m1-cB_1xzp-a2-m2-cB
8 1xzp-a2-m1-cB 131 49 0.1857 0.0992 0.2653 3.5 1xzp-a2-m1-cB_1xzp-a2-m2-cB
9 1xzq-a2-m2-cB 117 49 0.1857 0.1111 0.2653 3.7 1xzq-a2-m2-cB_1xzq-a2-m2-cA
10 4a61-a1-m2-cA 309 49 0.2000 0.0453 0.2857 5.6 4a61-a1-m1-cA_4a61-a1-m2-cA
11 4a61-a1-m1-cA 309 49 0.2000 0.0453 0.2857 5.6 4a61-a1-m1-cA_4a61-a1-m2-cA
12 4msp-a1-m1-cA 189 16 0.1286 0.0476 0.5625 9.1 4msp-a1-m1-cA_4msp-a1-m1-cB
13 4msp-a1-m1-cB 189 16 0.1286 0.0476 0.5625 9.2 4msp-a1-m1-cA_4msp-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600