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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
MAKEFGIPAAVAKTVLNVVEAGGWVTTIVSILTAVGSGGKSLLAAAGRESIKAYLKKEIK
KKGKRAVIAW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4rgd-a1-m1-cB 70 70 1.0000 1.0000 1.0000 2.16e-42 4rgd-a1-m1-cA_4rgd-a1-m1-cB
2 4rgd-a1-m1-cA 70 70 1.0000 1.0000 1.0000 2.16e-42 4rgd-a1-m1-cA_4rgd-a1-m1-cB
3 1o84-a1-m2-cB 70 70 0.9714 0.9714 0.9714 2.46e-40 1o84-a1-m1-cA_1o84-a1-m2-cB, 1o84-a1-m1-cB_1o84-a1-m2-cB, 1o84-a1-m2-cA_1o84-a1-m2-cB
4 1o84-a1-m2-cA 70 70 0.9714 0.9714 0.9714 2.46e-40 1o84-a1-m2-cA_1o84-a1-m2-cB
5 1o84-a1-m1-cB 70 70 0.9714 0.9714 0.9714 2.46e-40 1o84-a1-m1-cB_1o84-a1-m2-cB
6 1o84-a1-m1-cA 70 70 0.9714 0.9714 0.9714 2.46e-40 1o84-a1-m1-cA_1o84-a1-m2-cB
7 2xdq-a1-m2-cB 440 74 0.3286 0.0523 0.3108 1.3 2xdq-a1-m1-cB_2xdq-a1-m2-cB
8 2xdq-a1-m1-cB 440 74 0.3286 0.0523 0.3108 1.3 2xdq-a1-m1-cB_2xdq-a1-m2-cB
9 2ia2-a3-m1-cD 242 44 0.2143 0.0620 0.3409 7.5 2ia2-a3-m1-cD_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cB
10 2ia2-a3-m1-cA 247 44 0.2143 0.0607 0.3409 7.5 2ia2-a3-m1-cB_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cA
11 2ia2-a3-m1-cB 243 44 0.2143 0.0617 0.3409 8.1 2ia2-a3-m1-cB_2ia2-a3-m1-cA, 2ia2-a3-m1-cD_2ia2-a3-m1-cB
12 4fix-a2-m7-cB 629 35 0.2429 0.0270 0.4857 9.8 4fix-a2-m5-cB_4fix-a2-m7-cB
13 4fix-a2-m5-cB 629 35 0.2429 0.0270 0.4857 9.8 4fix-a2-m5-cB_4fix-a2-m7-cB

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Reference:
Jacob Schwartz et al.

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