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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
MAKKDIMGDKTVRVRADLHHIIKIETAKNGGNVKEVMDQALEEYIRKYLPDKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2cax-a1-m1-cA 53 53 1.0000 1.0000 1.0000 2.07e-33 2cax-a1-m1-cB_2cax-a1-m1-cA
2 2bnw-a1-m1-cC 53 53 1.0000 1.0000 1.0000 2.07e-33 2bnw-a1-m1-cB_2bnw-a1-m1-cC
3 2bnw-a1-m1-cB 53 53 1.0000 1.0000 1.0000 2.07e-33 2bnw-a1-m1-cB_2bnw-a1-m1-cC
4 2cax-a1-m1-cB 50 50 0.9434 1.0000 1.0000 3.09e-31 2cax-a1-m1-cB_2cax-a1-m1-cA
5 1rqg-a1-m2-cA 606 49 0.2642 0.0231 0.2857 0.40 1rqg-a1-m1-cA_1rqg-a1-m2-cA
6 1rqg-a1-m1-cA 606 49 0.2642 0.0231 0.2857 0.40 1rqg-a1-m1-cA_1rqg-a1-m2-cA
7 2kel-a1-m1-cB 46 31 0.1887 0.2174 0.3226 1.6 2kel-a1-m1-cA_2kel-a1-m1-cB
8 2kel-a1-m1-cA 46 31 0.1887 0.2174 0.3226 1.6 2kel-a1-m1-cA_2kel-a1-m1-cB
9 1wp1-a2-m5-cB 405 34 0.2642 0.0346 0.4118 2.3 1wp1-a2-m4-cB_1wp1-a2-m5-cB
10 1wp1-a2-m4-cB 405 34 0.2642 0.0346 0.4118 2.3 1wp1-a2-m4-cB_1wp1-a2-m5-cB
11 4b4u-a1-m1-cB 286 48 0.2642 0.0490 0.2917 6.6 4b4u-a1-m1-cA_4b4u-a1-m1-cB
12 2k6l-a1-m1-cB 51 42 0.1887 0.1961 0.2381 6.8 2k6l-a1-m1-cA_2k6l-a1-m1-cB
13 2k6l-a1-m1-cA 51 42 0.1887 0.1961 0.2381 6.8 2k6l-a1-m1-cA_2k6l-a1-m1-cB
14 4b4u-a1-m1-cA 282 48 0.2642 0.0496 0.2917 6.8 4b4u-a1-m1-cA_4b4u-a1-m1-cB
15 3or1-a1-m1-cE 385 20 0.1887 0.0260 0.5000 7.6 3or1-a1-m1-cB_3or1-a1-m1-cE
16 3or1-a1-m1-cB 385 20 0.1887 0.0260 0.5000 7.6 3or1-a1-m1-cB_3or1-a1-m1-cE
17 7va8-a1-m1-cB 439 41 0.2075 0.0251 0.2683 8.1 7va8-a1-m1-cB_7va8-a1-m1-cA
18 7va8-a1-m1-cA 456 41 0.2075 0.0241 0.2683 8.1 7va8-a1-m1-cB_7va8-a1-m1-cA
19 7dwm-a1-m1-cB 218 50 0.2830 0.0688 0.3000 8.9 7dwm-a1-m1-cA_7dwm-a1-m1-cB
20 7dwm-a1-m1-cA 218 50 0.2830 0.0688 0.3000 9.9 7dwm-a1-m1-cA_7dwm-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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