Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=80)
MAQHSKYSDAQLSAIVNDMIAVLEKHKAPVDLSLIALGNMASNLLTTSVPQTQCEALAQA
FSNSLINAVKTRLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2juz-a1-m1-cB 80 80 1.0000 1.0000 1.0000 7.49e-54 2juz-a1-m1-cA_2juz-a1-m1-cB
2 2juz-a1-m1-cA 80 80 1.0000 1.0000 1.0000 7.49e-54 2juz-a1-m1-cA_2juz-a1-m1-cB
3 2jrx-a1-m1-cB 83 77 0.4625 0.4458 0.4805 2.34e-18 2jrx-a1-m1-cA_2jrx-a1-m1-cB
4 2jrx-a1-m1-cA 83 77 0.4625 0.4458 0.4805 2.34e-18 2jrx-a1-m1-cA_2jrx-a1-m1-cB
5 2qti-a1-m2-cA 66 67 0.3750 0.4545 0.4478 3.24e-13 2qti-a1-m1-cA_2qti-a1-m2-cA
6 2qti-a1-m1-cA 66 67 0.3750 0.4545 0.4478 3.24e-13 2qti-a1-m1-cA_2qti-a1-m2-cA
7 2jpq-a1-m1-cB 83 71 0.3250 0.3133 0.3662 1.81e-10 2jpq-a1-m1-cA_2jpq-a1-m1-cB
8 2jpq-a1-m1-cA 83 71 0.3250 0.3133 0.3662 1.81e-10 2jpq-a1-m1-cA_2jpq-a1-m1-cB
9 2ota-a1-m1-cA 66 71 0.3125 0.3788 0.3521 1.17e-06 2ota-a1-m1-cB_2ota-a1-m1-cA
10 4xxv-a1-m1-cB 355 41 0.1750 0.0394 0.3415 1.8 4xxv-a1-m1-cB_4xxv-a1-m1-cA
11 4xxv-a1-m1-cA 356 41 0.1750 0.0393 0.3415 2.1 4xxv-a1-m1-cB_4xxv-a1-m1-cA
12 6iog-a1-m1-cB 374 8 0.1000 0.0214 1.0000 2.9 6iog-a1-m1-cA_6iog-a1-m1-cB
13 4ic6-a1-m2-cA 340 10 0.1000 0.0235 0.8000 3.2 4ic6-a1-m2-cC_4ic6-a1-m2-cA
14 4ic6-a1-m1-cA 340 10 0.1000 0.0235 0.8000 3.2 4ic6-a1-m2-cB_4ic6-a1-m1-cA
15 4ic6-a1-m2-cC 335 10 0.1000 0.0239 0.8000 3.5 4ic6-a1-m2-cC_4ic6-a1-m2-cA
16 4z6k-a1-m1-cC 345 9 0.1000 0.0232 0.8889 10.0 4z6k-a1-m1-cD_4z6k-a1-m1-cC
17 4z6k-a1-m1-cA 345 9 0.1000 0.0232 0.8889 10.0 4z6k-a1-m1-cD_4z6k-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600