Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQ
LNMYGWHKVQNNDSRWEFENER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hts-a1-m2-cB 82 82 1.0000 1.0000 1.0000 3.63e-57 3hts-a1-m1-cB_3hts-a1-m2-cB
2 3hts-a1-m1-cB 82 82 1.0000 1.0000 1.0000 3.63e-57 3hts-a1-m1-cB_3hts-a1-m2-cB
3 1fbs-a1-m1-cB 90 88 0.9512 0.8667 0.8864 5.74e-51 1fbs-a1-m1-cA_1fbs-a1-m1-cB
4 1fbs-a1-m1-cA 87 87 0.9390 0.8851 0.8851 3.66e-50 1fbs-a1-m1-cA_1fbs-a1-m1-cB
5 6j6w-a1-m2-cB 94 77 0.5000 0.4362 0.5325 3.12e-26 6j6w-a1-m1-cA_6j6w-a1-m2-cB, 6j6w-a1-m2-cA_6j6w-a1-m2-cB
6 6j6w-a1-m2-cA 94 77 0.5000 0.4362 0.5325 3.12e-26 6j6w-a1-m2-cA_6j6w-a1-m2-cB
7 6j6w-a1-m1-cA 94 77 0.5000 0.4362 0.5325 3.12e-26 6j6w-a1-m1-cA_6j6w-a1-m2-cB
8 7dcu-a1-m1-cB 102 71 0.4878 0.3922 0.5634 2.08e-25 7dcu-a1-m1-cC_7dcu-a1-m1-cB
9 5d8l-a2-m1-cH 106 71 0.4878 0.3774 0.5634 2.08e-25 5d8l-a2-m1-cF_5d8l-a2-m1-cH
10 5d8l-a2-m1-cF 98 78 0.5000 0.4184 0.5256 5.44e-25 5d8l-a2-m1-cF_5d8l-a2-m1-cH
11 7dcu-a1-m1-cC 92 66 0.4634 0.4130 0.5758 1.18e-24 7dcu-a1-m1-cC_7dcu-a1-m1-cB
12 5d5u-a1-m2-cB 100 76 0.5000 0.4100 0.5395 7.85e-24 5d5u-a1-m1-cB_5d5u-a1-m2-cB
13 5d5u-a1-m1-cB 100 76 0.5000 0.4100 0.5395 7.85e-24 5d5u-a1-m1-cB_5d5u-a1-m2-cB
14 7dcs-a2-m1-cF 93 66 0.4756 0.4194 0.5909 1.29e-23 7dcs-a2-m1-cF_7dcs-a2-m1-cE
15 5hdg-a2-m2-cA 94 66 0.4756 0.4149 0.5909 1.60e-23 5hdg-a2-m1-cA_5hdg-a2-m2-cA
16 5hdg-a2-m1-cA 94 66 0.4756 0.4149 0.5909 1.60e-23 5hdg-a2-m1-cA_5hdg-a2-m2-cA
17 7dcs-a2-m1-cE 105 66 0.4756 0.3714 0.5909 1.77e-23 7dcs-a2-m1-cF_7dcs-a2-m1-cE
18 5d5x-a1-m1-cB 99 80 0.5000 0.4141 0.5125 1.11e-22 5d5x-a1-m1-cE_5d5x-a1-m1-cB
19 5d5x-a1-m1-cE 98 79 0.4878 0.4082 0.5063 9.86e-22 5d5x-a1-m1-cE_5d5x-a1-m1-cB
20 6ph4-a1-m1-cB 460 41 0.1707 0.0304 0.3415 0.71 6ph4-a1-m1-cA_6ph4-a1-m1-cB
21 5epv-a3-m1-cA 216 43 0.1707 0.0648 0.3256 0.97 5epv-a3-m1-cB_5epv-a3-m1-cA
22 6nag-a1-m1-cA 351 16 0.1098 0.0256 0.5625 3.3 6nag-a1-m1-cB_6nag-a1-m1-cA
23 4tmt-a3-m1-cA 342 26 0.1463 0.0351 0.4615 3.6 4tmt-a3-m1-cA_4tmt-a3-m1-cB
24 4tmt-a3-m1-cB 345 26 0.1463 0.0348 0.4615 3.6 4tmt-a3-m1-cA_4tmt-a3-m1-cB
25 4n3n-a2-m2-cA 587 26 0.1463 0.0204 0.4615 3.7 4n3n-a2-m1-cA_4n3n-a2-m2-cA
26 4n3n-a2-m1-cA 587 26 0.1463 0.0204 0.4615 3.7 4n3n-a2-m1-cA_4n3n-a2-m2-cA
27 4nnc-a2-m2-cA 483 24 0.1220 0.0207 0.4167 8.8 4nnc-a2-m1-cA_4nnc-a2-m2-cA
28 4nnc-a2-m1-cA 483 24 0.1220 0.0207 0.4167 8.8 4nnc-a2-m1-cA_4nnc-a2-m2-cA
29 2ef0-a2-m3-cA 287 28 0.1098 0.0314 0.3214 10.0 2ef0-a2-m2-cA_2ef0-a2-m3-cA
30 2ef0-a2-m2-cA 287 28 0.1098 0.0314 0.3214 10.0 2ef0-a2-m2-cA_2ef0-a2-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600