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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MASLKEIIDELGKQAKEQNKIASRIMKIKGIKRIVVQLNAVPQDGKIRYSMTIHSQNNFR
KQIGITPQDAEDLKLIAEFLEKYSDFLNEYVKFT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2x5h-a1-m1-cD 94 94 1.0000 1.0000 1.0000 4.07e-65 2x5h-a1-m1-cA_2x5h-a1-m1-cD
2 2x5h-a1-m1-cA 92 91 0.9681 0.9891 1.0000 1.57e-62 2x5h-a1-m1-cA_2x5h-a1-m1-cD
3 2x5g-a1-m2-cA 90 93 0.9362 0.9778 0.9462 5.87e-56 2x5g-a1-m1-cA_2x5g-a1-m2-cA
4 2x5g-a1-m1-cA 90 93 0.9362 0.9778 0.9462 5.87e-56 2x5g-a1-m1-cA_2x5g-a1-m2-cA
5 3ct4-a4-m6-cA 318 37 0.1596 0.0472 0.4054 0.77 3ct4-a4-m3-cC_3ct4-a4-m6-cA
6 3ct4-a4-m3-cC 318 37 0.1596 0.0472 0.4054 0.77 3ct4-a4-m3-cB_3ct4-a4-m3-cC, 3ct4-a4-m3-cC_3ct4-a4-m6-cA
7 3ct4-a4-m3-cB 318 37 0.1596 0.0472 0.4054 0.77 3ct4-a4-m3-cB_3ct4-a4-m3-cC
8 3ct4-a3-m4-cC 318 37 0.1596 0.0472 0.4054 0.77 3ct4-a3-m1-cC_3ct4-a3-m4-cC
9 3ct4-a3-m1-cC 318 37 0.1596 0.0472 0.4054 0.77 3ct4-a3-m1-cC_3ct4-a3-m4-cC
10 7m92-a1-m1-cB 358 40 0.1596 0.0419 0.3750 1.3 7m92-a1-m1-cA_7m92-a1-m1-cB
11 7m92-a1-m1-cA 358 40 0.1596 0.0419 0.3750 1.3 7m92-a1-m1-cA_7m92-a1-m1-cB
12 1r9d-a1-m1-cB 786 42 0.1596 0.0191 0.3571 2.2 1r9d-a1-m1-cA_1r9d-a1-m1-cB
13 1r9d-a1-m1-cA 786 42 0.1596 0.0191 0.3571 2.2 1r9d-a1-m1-cA_1r9d-a1-m1-cB
14 6vfw-a2-m1-cB 423 39 0.1383 0.0307 0.3333 2.3 6vfw-a2-m1-cB_6vfw-a2-m1-cD
15 6vfw-a2-m1-cD 423 39 0.1383 0.0307 0.3333 2.4 6vfw-a2-m1-cB_6vfw-a2-m1-cD
16 7fd9-a1-m1-cB 767 50 0.1170 0.0143 0.2200 2.9 7fd9-a1-m1-cA_7fd9-a1-m1-cB
17 7fd9-a1-m1-cA 767 50 0.1170 0.0143 0.2200 2.9 7fd9-a1-m1-cA_7fd9-a1-m1-cB
18 6n4x-a1-m1-cB 487 50 0.1170 0.0226 0.2200 3.1 6n4x-a1-m1-cB_6n4x-a1-m1-cA
19 1vp4-a1-m1-cB 408 53 0.1809 0.0417 0.3208 3.1 1vp4-a1-m1-cB_1vp4-a1-m1-cA
20 6n4x-a1-m1-cA 506 50 0.1170 0.0217 0.2200 3.1 6n4x-a1-m1-cB_6n4x-a1-m1-cA
21 3lmk-a1-m1-cA 438 50 0.1170 0.0251 0.2200 3.3 3lmk-a1-m1-cA_3lmk-a1-m1-cB
22 3lmk-a1-m1-cB 439 50 0.1170 0.0251 0.2200 3.4 3lmk-a1-m1-cA_3lmk-a1-m1-cB
23 1vp4-a1-m1-cA 412 53 0.1809 0.0413 0.3208 3.4 1vp4-a1-m1-cB_1vp4-a1-m1-cA
24 8dk1-a1-m1-cG 176 30 0.1170 0.0625 0.3667 5.8 8dk1-a1-m1-cG_8dk1-a1-m1-cH
25 8dk1-a1-m1-cH 189 30 0.1170 0.0582 0.3667 6.1 8dk1-a1-m1-cG_8dk1-a1-m1-cH
26 6ynz-a1-m1-ci4 68 37 0.1277 0.1765 0.3243 8.4 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
27 7o0h-a1-m1-cA 566 16 0.1064 0.0177 0.6250 8.7 7o0h-a1-m1-cB_7o0h-a1-m1-cA
28 7o0h-a1-m1-cB 523 16 0.1064 0.0191 0.6250 9.0 7o0h-a1-m1-cB_7o0h-a1-m1-cA
29 1qo8-a1-m1-cD 564 30 0.1489 0.0248 0.4667 9.7 1qo8-a1-m1-cA_1qo8-a1-m1-cD
30 1qo8-a1-m1-cA 564 30 0.1489 0.0248 0.4667 9.7 1qo8-a1-m1-cA_1qo8-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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