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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MATESPNSVQKIVVHLRATGGAPILKQSKFKVSGSDKFANVIDFLRRQLHSDSLFVYVNS
AFSPNPDESVIDLYNNFGFDGKLVVNYACSMAWG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eu4-a3-m1-cE 94 94 1.0000 1.0000 1.0000 7.81e-67 7eu4-a3-m1-cF_7eu4-a3-m1-cE
2 7eu4-a3-m1-cF 85 85 0.9043 1.0000 1.0000 9.95e-60 7eu4-a3-m1-cF_7eu4-a3-m1-cE
3 7eu4-a5-m1-cJ 84 84 0.8936 1.0000 1.0000 6.97e-59 7eu4-a5-m1-cI_7eu4-a5-m1-cJ
4 7eu4-a5-m1-cI 84 84 0.8936 1.0000 1.0000 6.97e-59 7eu4-a5-m1-cI_7eu4-a5-m1-cJ
5 7eu4-a7-m1-cM 81 81 0.8617 1.0000 1.0000 1.03e-55 7eu4-a7-m1-cN_7eu4-a7-m1-cM
6 7eu4-a7-m1-cN 74 82 0.7872 1.0000 0.9024 7.15e-48 7eu4-a7-m1-cN_7eu4-a7-m1-cM
7 5cx3-a3-m1-cD 117 95 0.2234 0.1795 0.2211 0.034 5cx3-a3-m1-cD_5cx3-a3-m1-cB, 5cx3-a3-m1-cD_5cx3-a3-m1-cC
8 5cx3-a3-m1-cB 118 95 0.2234 0.1780 0.2211 0.039 5cx3-a3-m1-cB_5cx3-a3-m1-cA, 5cx3-a3-m1-cD_5cx3-a3-m1-cB
9 5cx3-a3-m1-cC 119 95 0.2234 0.1765 0.2211 0.041 5cx3-a3-m1-cD_5cx3-a3-m1-cC
10 5cx3-a3-m1-cA 119 95 0.2234 0.1765 0.2211 0.041 5cx3-a3-m1-cB_5cx3-a3-m1-cA
11 3wan-a1-m1-cB 128 95 0.2234 0.1641 0.2211 0.044 3wan-a1-m1-cA_3wan-a1-m1-cB
12 3wan-a1-m1-cA 126 94 0.2128 0.1587 0.2128 0.38 3wan-a1-m1-cA_3wan-a1-m1-cB
13 4oki-a2-m2-cA 181 71 0.1702 0.0884 0.2254 1.9 4oki-a2-m1-cB_4oki-a2-m2-cA
14 4oki-a1-m1-cA 181 71 0.1702 0.0884 0.2254 1.9 4oki-a1-m1-cB_4oki-a1-m1-cA
15 4oki-a2-m1-cB 179 71 0.1702 0.0894 0.2254 2.0 4oki-a2-m1-cB_4oki-a2-m2-cA
16 4oki-a1-m1-cB 179 71 0.1702 0.0894 0.2254 2.0 4oki-a1-m1-cB_4oki-a1-m1-cA
17 2es4-a3-m4-cA 316 30 0.1383 0.0411 0.4333 2.9 2es4-a3-m1-cB_2es4-a3-m4-cA
18 2es4-a3-m1-cB 314 30 0.1383 0.0414 0.4333 2.9 2es4-a3-m1-cB_2es4-a3-m4-cA
19 7pqh-a1-m1-cF 2238 27 0.1277 0.0054 0.4444 6.5 7pqh-a1-m1-cE_7pqh-a1-m1-cF
20 7pqh-a1-m1-cE 2238 27 0.1277 0.0054 0.4444 6.5 7pqh-a1-m1-cE_7pqh-a1-m1-cF
21 6emk-a1-m1-cC 2262 27 0.1277 0.0053 0.4444 6.9 6emk-a1-m1-cA_6emk-a1-m1-cC
22 6emk-a1-m1-cA 2262 27 0.1277 0.0053 0.4444 6.9 6emk-a1-m1-cA_6emk-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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