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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=24)
MATNFDILKRLSNLEKHVFGSKLY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5an5-a2-m1-cD 26 24 1.0000 0.9231 1.0000 8.66e-12 5an5-a2-m1-cJ_5an5-a2-m1-cD
2 5an5-a2-m1-cJ 24 24 1.0000 1.0000 1.0000 9.12e-12 5an5-a2-m1-cJ_5an5-a2-m1-cD
3 5an5-a3-m1-cE 23 22 0.9167 0.9565 1.0000 4.89e-10 5an5-a3-m1-cG_5an5-a3-m1-cE
4 5an5-a1-m1-cI 23 21 0.8750 0.9130 1.0000 1.73e-09 5an5-a1-m1-cB_5an5-a1-m1-cI
5 5an5-a1-m1-cB 21 20 0.8333 0.9524 1.0000 7.47e-09 5an5-a1-m1-cB_5an5-a1-m1-cI
6 5an5-a3-m1-cG 17 17 0.7083 1.0000 1.0000 2.56e-06 5an5-a3-m1-cG_5an5-a3-m1-cE
7 3vnj-a1-m1-cD 289 19 0.4167 0.0346 0.5263 0.62 3vnj-a1-m1-cB_3vnj-a1-m1-cD
8 3vni-a1-m1-cA 289 19 0.4167 0.0346 0.5263 0.62 3vni-a1-m1-cD_3vni-a1-m1-cA
9 3vnj-a1-m1-cB 288 19 0.4167 0.0347 0.5263 0.62 3vnj-a1-m1-cB_3vnj-a1-m1-cD
10 3vni-a1-m1-cD 288 19 0.4167 0.0347 0.5263 0.62 3vni-a1-m1-cC_3vni-a1-m1-cD, 3vni-a1-m1-cD_3vni-a1-m1-cA
11 3vni-a1-m1-cC 288 19 0.4167 0.0347 0.5263 0.62 3vni-a1-m1-cC_3vni-a1-m1-cD
12 7x7w-a1-m2-cB 288 19 0.3333 0.0278 0.4211 4.1 7x7w-a1-m1-cA_7x7w-a1-m2-cB
13 7x7w-a1-m1-cA 288 19 0.3333 0.0278 0.4211 4.1 7x7w-a1-m1-cA_7x7w-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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