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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP
IRDYRIDEKNFVVVMVT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wyq-a1-m2-cA 77 77 1.0000 1.0000 1.0000 3.20e-51 2wyq-a1-m1-cA_2wyq-a1-m2-cA
2 2wyq-a1-m1-cA 77 77 1.0000 1.0000 1.0000 3.20e-51 2wyq-a1-m1-cA_2wyq-a1-m2-cA
3 6ob1-a1-m1-cA 75 76 0.3117 0.3200 0.3158 3.88e-08 6ob1-a1-m1-cA_6ob1-a1-m1-cB
4 6nxl-a3-m1-cC 73 73 0.3117 0.3288 0.3288 4.28e-08 6nxl-a3-m1-cC_6nxl-a3-m1-cD
5 6nxl-a3-m1-cD 74 73 0.3117 0.3243 0.3288 4.37e-08 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6ob1-a1-m1-cB 75 76 0.2987 0.3067 0.3026 4.72e-07 6ob1-a1-m1-cA_6ob1-a1-m1-cB
7 5o6t-a2-m1-cC 75 75 0.2857 0.2933 0.2933 5.67e-07 5o6t-a2-m1-cD_5o6t-a2-m1-cC
8 5o6s-a2-m1-cC 75 75 0.2857 0.2933 0.2933 5.67e-07 5o6s-a2-m1-cC_5o6s-a2-m1-cD
9 5o6t-a2-m1-cD 74 75 0.2857 0.2973 0.2933 5.99e-07 5o6t-a2-m1-cD_5o6t-a2-m1-cC
10 5o6s-a2-m1-cD 75 75 0.2857 0.2933 0.2933 6.19e-07 5o6s-a2-m1-cC_5o6s-a2-m1-cD
11 1ndd-a5-m1-cA 74 62 0.2987 0.3108 0.3710 1.25e-06 1ndd-a5-m1-cD_1ndd-a5-m1-cA
12 1ndd-a5-m1-cD 73 62 0.2987 0.3151 0.3710 1.31e-06 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
13 1ndd-a5-m1-cC 73 62 0.2987 0.3151 0.3710 1.31e-06 1ndd-a5-m1-cC_1ndd-a5-m1-cD
14 1ndd-a5-m1-cB 76 62 0.2987 0.3026 0.3710 1.47e-06 1ndd-a5-m1-cD_1ndd-a5-m1-cB
15 8cx9-a4-m1-cJ 74 62 0.2727 0.2838 0.3387 4.35e-06 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
16 8cx9-a4-m1-cH 74 62 0.2727 0.2838 0.3387 4.35e-06 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
17 7rma-a1-m2-cA 75 75 0.2987 0.3067 0.3067 5.83e-06 7rma-a1-m1-cA_7rma-a1-m2-cA
18 7rma-a1-m1-cA 75 75 0.2987 0.3067 0.3067 5.83e-06 7rma-a1-m1-cA_7rma-a1-m2-cA
19 5tog-a2-m2-cA 75 69 0.2857 0.2933 0.3188 2.39e-04 5tog-a2-m1-cA_5tog-a2-m2-cA
20 5tog-a2-m1-cA 75 69 0.2857 0.2933 0.3188 2.39e-04 5tog-a2-m1-cA_5tog-a2-m2-cA
21 6dj9-a3-m1-cJ 77 54 0.2468 0.2468 0.3519 2.57e-04 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
22 6dj9-a3-m1-cI 78 70 0.2597 0.2564 0.2857 2.85e-04 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
23 6njg-a1-m2-cC 76 62 0.2597 0.2632 0.3226 0.002 6njg-a1-m1-cC_6njg-a1-m2-cC
24 6njg-a1-m1-cC 76 62 0.2597 0.2632 0.3226 0.002 6njg-a1-m1-cC_6njg-a1-m2-cC
25 4a20-a1-m2-cA 80 77 0.2727 0.2625 0.2727 0.002 4a20-a1-m1-cA_4a20-a1-m2-cA
26 4a20-a1-m1-cA 80 77 0.2727 0.2625 0.2727 0.002 4a20-a1-m1-cA_4a20-a1-m2-cA
27 3jtw-a2-m3-cB 169 45 0.2078 0.0947 0.3556 1.1 3jtw-a2-m1-cB_3jtw-a2-m3-cB
28 3jtw-a2-m1-cB 169 45 0.2078 0.0947 0.3556 1.1 3jtw-a2-m1-cB_3jtw-a2-m3-cB
29 7met-a1-m1-cB 455 64 0.2208 0.0374 0.2656 2.7 7met-a1-m1-cB_7met-a1-m1-cA
30 7met-a1-m1-cA 564 64 0.2208 0.0301 0.2656 3.6 7met-a1-m1-cB_7met-a1-m1-cA
31 7rit-a1-m1-cB 569 64 0.2208 0.0299 0.2656 3.6 7rit-a1-m1-cA_7rit-a1-m1-cB
32 7rit-a1-m1-cA 569 64 0.2208 0.0299 0.2656 3.6 7rit-a1-m1-cA_7rit-a1-m1-cB
33 6tp5-a1-m1-cB 356 29 0.1429 0.0309 0.3793 4.4 6tp5-a1-m1-cB_6tp5-a1-m1-cA
34 6tp5-a1-m1-cA 370 29 0.1429 0.0297 0.3793 4.9 6tp5-a1-m1-cB_6tp5-a1-m1-cA
35 1lj9-a1-m1-cB 142 38 0.1688 0.0915 0.3421 5.1 1lj9-a1-m1-cB_1lj9-a1-m1-cA
36 1lj9-a1-m1-cA 144 38 0.1688 0.0903 0.3421 5.2 1lj9-a1-m1-cB_1lj9-a1-m1-cA
37 2vxb-a1-m1-cA 225 37 0.1558 0.0533 0.3243 7.9 2vxb-a1-m1-cB_2vxb-a1-m1-cA
38 2vxb-a1-m1-cB 224 37 0.1558 0.0536 0.3243 8.7 2vxb-a1-m1-cB_2vxb-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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