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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
MDDLVFAGNKALYLVLILSGWPTIVATCLFLLSGWYGEVLLSYGRQVIFLALA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q16-a1-m1-c6 53 53 1.0000 1.0000 1.0000 1.97e-32 6q16-a1-m1-c6_6q16-a1-m1-c7
2 7agx-a1-m1-c1G 73 73 0.9811 0.7123 0.7123 2.31e-26 7agx-a1-m1-c1G_7agx-a1-m1-c1H
3 6q16-a1-m1-c7 84 84 1.0000 0.6310 0.6310 5.33e-26 6q16-a1-m1-c6_6q16-a1-m1-c7
4 7agx-a1-m1-c1H 83 83 0.9811 0.6265 0.6265 4.17e-25 7agx-a1-m1-c1G_7agx-a1-m1-c1H
5 8axk-a1-m1-cJ 67 63 0.6038 0.4776 0.5079 8.12e-14 8axk-a1-m1-cI_8axk-a1-m1-cJ
6 8axk-a1-m1-cI 63 59 0.5849 0.4921 0.5254 2.72e-13 8axk-a1-m1-cI_8axk-a1-m1-cH, 8axk-a1-m1-cI_8axk-a1-m1-cJ
7 8axk-a1-m1-cH 75 71 0.6038 0.4267 0.4507 1.56e-12 8axk-a1-m1-cI_8axk-a1-m1-cH
8 6r6b-a1-m1-cI 85 81 0.6038 0.3765 0.3951 4.90e-11 6r6b-a1-m1-cH_6r6b-a1-m1-cI
9 6r6b-a1-m1-cH 85 81 0.6038 0.3765 0.3951 4.90e-11 6r6b-a1-m1-cH_6r6b-a1-m1-cI
10 1w7w-a1-m1-cF 150 37 0.2642 0.0933 0.3784 2.1 1w7w-a1-m1-cD_1w7w-a1-m1-cF, 1w7w-a1-m1-cF_1w7w-a1-m1-cE
11 1w7w-a1-m1-cD 150 37 0.2642 0.0933 0.3784 2.1 1w7w-a1-m1-cD_1w7w-a1-m1-cF
12 1w7w-a1-m1-cE 151 37 0.2642 0.0927 0.3784 2.1 1w7w-a1-m1-cF_1w7w-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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