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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MDEADRRLLRRCRLRLVEELQVDQLWDVLLSRELFRPHMIEDIQRAGSGSRRDQARQLII
DLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wve-a1-m1-cV 96 96 1.0000 1.0000 1.0000 4.33e-64 5wve-a1-m1-cS_5wve-a1-m1-cV
2 5wve-a1-m1-cS 96 96 1.0000 1.0000 1.0000 4.33e-64 5wve-a1-m1-cS_5wve-a1-m1-cV
3 5wvc-a1-m1-cD 102 96 0.9896 0.9314 0.9896 2.26e-61 5wvc-a1-m1-cB_5wvc-a1-m1-cD
4 5wvc-a1-m1-cB 102 96 0.9896 0.9314 0.9896 2.26e-61 5wvc-a1-m1-cB_5wvc-a1-m1-cD
5 3f4w-a1-m1-cB 211 47 0.1562 0.0711 0.3191 0.73 3f4w-a1-m1-cA_3f4w-a1-m1-cB
6 3f4w-a1-m1-cA 211 47 0.1562 0.0711 0.3191 0.73 3f4w-a1-m1-cA_3f4w-a1-m1-cB
7 1vf1-a1-m2-cA 226 38 0.1250 0.0531 0.3158 3.5 1vf1-a1-m1-cA_1vf1-a1-m2-cA
8 1vf1-a1-m1-cA 226 38 0.1250 0.0531 0.3158 3.5 1vf1-a1-m1-cA_1vf1-a1-m2-cA
9 4kgn-a1-m1-cA 139 64 0.1979 0.1367 0.2969 5.2 4kgn-a1-m1-cA_4kgn-a1-m1-cB
10 8f3e-a1-m1-cC 1032 35 0.1458 0.0136 0.4000 6.1 8f3e-a1-m1-cB_8f3e-a1-m1-cC
11 8f3e-a1-m1-cB 1032 35 0.1458 0.0136 0.4000 6.1 8f3e-a1-m1-cB_8f3e-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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