Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=65)
MDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELR
QSNHR

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1an4-a1-m1-cB 65 65 1.0000 1.0000 1.0000 1.22e-42 1an4-a1-m1-cA_1an4-a1-m1-cB
2 1an4-a1-m1-cA 65 65 1.0000 1.0000 1.0000 1.22e-42 1an4-a1-m1-cA_1an4-a1-m1-cB
3 5eyo-a2-m2-cC 88 60 0.3846 0.2841 0.4167 1.93e-08 5eyo-a2-m1-cC_5eyo-a2-m2-cC
4 5eyo-a2-m1-cC 88 60 0.3846 0.2841 0.4167 1.93e-08 5eyo-a2-m1-cC_5eyo-a2-m2-cC
5 7ssa-a1-m1-cL 67 60 0.3692 0.3582 0.4000 1.06e-07 7ssa-a1-m1-cK_7ssa-a1-m1-cL
6 7ssa-a1-m1-cK 67 60 0.3692 0.3582 0.4000 1.06e-07 7ssa-a1-m1-cK_7ssa-a1-m1-cL
7 1r05-a1-m1-cB 87 60 0.3692 0.2759 0.4000 4.49e-07 1r05-a1-m1-cA_1r05-a1-m1-cB
8 1r05-a1-m1-cA 87 60 0.3692 0.2759 0.4000 4.49e-07 1r05-a1-m1-cA_1r05-a1-m1-cB
9 1am9-a1-m1-cC 82 61 0.3231 0.2561 0.3443 2.23e-06 1am9-a1-m1-cD_1am9-a1-m1-cC
10 1am9-a1-m1-cD 76 61 0.3231 0.2763 0.3443 2.42e-06 1am9-a1-m1-cD_1am9-a1-m1-cC
11 7f2f-a1-m1-cB 94 62 0.3846 0.2660 0.4032 1.10e-05 7f2f-a1-m1-cA_7f2f-a1-m1-cB
12 7d8t-a1-m1-cB 199 57 0.3538 0.1156 0.4035 2.70e-05 7d8t-a1-m1-cA_7d8t-a1-m1-cB
13 7d8t-a1-m1-cA 199 57 0.3538 0.1156 0.4035 2.70e-05 7d8t-a1-m1-cA_7d8t-a1-m1-cB
14 7f2f-a1-m1-cA 90 63 0.4000 0.2889 0.4127 3.19e-05 7f2f-a1-m1-cA_7f2f-a1-m1-cB
15 7d8s-a2-m1-cC 184 57 0.3385 0.1196 0.3860 2.48e-04 7d8s-a2-m1-cD_7d8s-a2-m1-cC
16 5gnj-a2-m1-cA 74 52 0.2769 0.2432 0.3462 0.002 5gnj-a2-m1-cA_5gnj-a2-m1-cB
17 5gnj-a2-m1-cB 77 52 0.2769 0.2338 0.3462 0.002 5gnj-a2-m1-cA_5gnj-a2-m1-cB
18 1ukl-a2-m1-cF 58 49 0.2615 0.2931 0.3469 0.004 1ukl-a2-m1-cE_1ukl-a2-m1-cF
19 1ukl-a2-m1-cE 58 49 0.2615 0.2931 0.3469 0.004 1ukl-a2-m1-cE_1ukl-a2-m1-cF
20 1a0a-a1-m1-cB 63 58 0.2308 0.2381 0.2586 0.12 1a0a-a1-m1-cA_1a0a-a1-m1-cB
21 1a0a-a1-m1-cA 63 58 0.2308 0.2381 0.2586 0.12 1a0a-a1-m1-cA_1a0a-a1-m1-cB
22 6fx5-a1-m1-cB 74 45 0.2615 0.2297 0.3778 0.27 6fx5-a1-m1-cA_6fx5-a1-m1-cB
23 6fx5-a1-m1-cA 72 42 0.2462 0.2222 0.3810 0.40 6fx5-a1-m1-cA_6fx5-a1-m1-cB
24 7eod-a2-m1-cD 69 46 0.2462 0.2319 0.3478 0.80 7eod-a2-m1-cC_7eod-a2-m1-cD
25 3u5v-a1-m2-cA 62 53 0.2923 0.3065 0.3585 1.5 3u5v-a1-m1-cA_3u5v-a1-m2-cA
26 3u5v-a1-m1-cA 62 53 0.2923 0.3065 0.3585 1.5 3u5v-a1-m1-cA_3u5v-a1-m2-cA
27 7eod-a2-m1-cC 66 46 0.2462 0.2424 0.3478 1.6 7eod-a2-m1-cC_7eod-a2-m1-cD
28 4evx-a4-m2-cB 89 33 0.1231 0.0899 0.2424 1.7 4evx-a4-m2-cB_4evx-a4-m1-cA
29 4evx-a3-m1-cB 89 33 0.1231 0.0899 0.2424 1.7 4evx-a3-m1-cB_4evx-a3-m1-cA
30 4evx-a2-m3-cB 89 33 0.1231 0.0899 0.2424 1.7 4evx-a2-m3-cB_4evx-a2-m1-cA
31 4evx-a4-m1-cA 92 33 0.1231 0.0870 0.2424 2.1 4evx-a4-m2-cB_4evx-a4-m1-cA
32 4evx-a3-m1-cA 92 33 0.1231 0.0870 0.2424 2.1 4evx-a3-m1-cB_4evx-a3-m1-cA
33 4evx-a2-m3-cA 92 33 0.1231 0.0870 0.2424 2.1 4evx-a2-m1-cA_4evx-a2-m3-cA
34 4evx-a2-m1-cA 92 33 0.1231 0.0870 0.2424 2.1 4evx-a2-m1-cA_4evx-a2-m3-cA, 4evx-a2-m3-cB_4evx-a2-m1-cA
35 7d8r-a2-m1-cD 174 46 0.2462 0.0920 0.3478 2.9 7d8r-a2-m1-cC_7d8r-a2-m1-cD
36 7d8s-a2-m1-cD 175 49 0.2615 0.0971 0.3469 4.4 7d8s-a2-m1-cD_7d8s-a2-m1-cC
37 7d8r-a2-m1-cC 168 46 0.2308 0.0893 0.3261 4.9 7d8r-a2-m1-cC_7d8r-a2-m1-cD
38 2mh3-a1-m1-cB 70 62 0.2769 0.2571 0.2903 5.0 2mh3-a1-m1-cA_2mh3-a1-m1-cB
39 2mh3-a1-m1-cA 70 62 0.2769 0.2571 0.2903 5.0 2mh3-a1-m1-cA_2mh3-a1-m1-cB
40 7f09-a2-m1-cD 65 46 0.2308 0.2308 0.3261 8.4 7f09-a2-m1-cD_7f09-a2-m1-cC
41 7f09-a2-m1-cC 67 46 0.2308 0.2239 0.3261 9.3 7f09-a2-m1-cD_7f09-a2-m1-cC
42 7y62-a1-m1-cB 69 45 0.2308 0.2174 0.3333 9.7 7y62-a1-m1-cB_7y62-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600