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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
MDFREVIEQRYHQLLSRYIAELTETSLIQAQKFSRKTIEHQIPPEEIISIHRKVLKELYP
SLPEDVFHSLDFLIEVMIGYGMAYQE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2j6z-a1-m2-cA 86 86 1.0000 1.0000 1.0000 1.39e-58 2j6z-a1-m1-cA_2j6z-a1-m2-cA
2 2j6z-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.39e-58 2j6z-a1-m1-cA_2j6z-a1-m2-cA
3 7qqa-a2-m1-cD 273 84 0.2209 0.0696 0.2262 0.31 7qqa-a2-m1-cC_7qqa-a2-m1-cD
4 7qqa-a2-m1-cC 271 82 0.2093 0.0664 0.2195 1.7 7qqa-a2-m1-cC_7qqa-a2-m1-cD
5 1mzj-a1-m1-cB 334 44 0.2093 0.0539 0.4091 7.4 1mzj-a1-m1-cA_1mzj-a1-m1-cB
6 1mzj-a1-m1-cA 334 44 0.2093 0.0539 0.4091 7.4 1mzj-a1-m1-cA_1mzj-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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