Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=62)
MDKKELFDTVINLEEQIGSLYRQLGDLKQHIGEMIEENHHLQLENKHLRKRLDDTTQQIE
KF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5dol-a1-m2-cB 62 62 1.0000 1.0000 1.0000 2.37e-39 5dol-a1-m1-cA_5dol-a1-m2-cB, 5dol-a1-m1-cB_5dol-a1-m2-cB, 5dol-a1-m2-cA_5dol-a1-m2-cB
2 5dol-a1-m1-cB 62 62 1.0000 1.0000 1.0000 2.37e-39 5dol-a1-m1-cB_5dol-a1-m2-cB
3 5dol-a1-m2-cA 61 61 0.9839 1.0000 1.0000 1.97e-38 5dol-a1-m2-cA_5dol-a1-m2-cB
4 5dol-a1-m1-cA 61 61 0.9839 1.0000 1.0000 1.97e-38 5dol-a1-m1-cA_5dol-a1-m2-cB
5 8glv-a1-m1-cCp 1075 48 0.2742 0.0158 0.3542 0.048 8glv-a1-m1-cCp_8glv-a1-m1-cCq
6 8glv-a1-m1-cCq 1076 48 0.2742 0.0158 0.3542 0.048 8glv-a1-m1-cCp_8glv-a1-m1-cCq
7 3bas-a1-m1-cA 80 48 0.2581 0.2000 0.3333 0.77 3bas-a1-m1-cA_3bas-a1-m1-cB
8 3bas-a1-m1-cB 87 48 0.2581 0.1839 0.3333 0.85 3bas-a1-m1-cA_3bas-a1-m1-cB
9 1dip-a1-m1-cB 77 36 0.2258 0.1818 0.3889 2.5 1dip-a1-m1-cA_1dip-a1-m1-cB
10 1dip-a1-m1-cA 77 36 0.2258 0.1818 0.3889 2.5 1dip-a1-m1-cA_1dip-a1-m1-cB
11 3m1r-a1-m1-cD 313 28 0.1290 0.0256 0.2857 6.6 3m1r-a1-m1-cB_3m1r-a1-m1-cD
12 3m1r-a3-m1-cF 309 28 0.1290 0.0259 0.2857 6.8 3m1r-a3-m1-cE_3m1r-a3-m1-cF
13 3m1r-a1-m1-cF 309 28 0.1290 0.0259 0.2857 6.8 3m1r-a1-m1-cC_3m1r-a1-m1-cF
14 3m1r-a3-m1-cE 309 28 0.1290 0.0259 0.2857 6.9 3m1r-a3-m1-cE_3m1r-a3-m1-cF
15 3m1r-a1-m1-cC 309 28 0.1290 0.0259 0.2857 6.9 3m1r-a1-m1-cC_3m1r-a1-m1-cF
16 3m1r-a1-m1-cB 309 28 0.1290 0.0259 0.2857 6.9 3m1r-a1-m1-cB_3m1r-a1-m1-cD
17 4cvu-a1-m2-cA 913 16 0.1613 0.0110 0.6250 7.9 4cvu-a1-m1-cA_4cvu-a1-m2-cA
18 4cvu-a1-m1-cA 913 16 0.1613 0.0110 0.6250 7.9 4cvu-a1-m1-cA_4cvu-a1-m2-cA
19 4xbf-a1-m4-cA 666 20 0.1452 0.0135 0.4500 7.9 4xbf-a1-m2-cA_4xbf-a1-m4-cA, 4xbf-a1-m3-cA_4xbf-a1-m4-cA
20 4xbf-a1-m3-cA 666 20 0.1452 0.0135 0.4500 7.9 4xbf-a1-m3-cA_4xbf-a1-m4-cA
21 4xbf-a1-m2-cA 666 20 0.1452 0.0135 0.4500 7.9 4xbf-a1-m2-cA_4xbf-a1-m4-cA
22 2dm9-a1-m1-cB 118 41 0.1935 0.1017 0.2927 8.0 2dm9-a1-m1-cA_2dm9-a1-m1-cB
23 2dm9-a1-m1-cA 118 41 0.1935 0.1017 0.2927 8.0 2dm9-a1-m1-cA_2dm9-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600