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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
MDLAPQMLRELQETNAALQDVRELLRQQVKEITFLKNTVMECDAC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3v2p-a1-m1-cE 45 45 1.0000 1.0000 1.0000 5.61e-27 3v2p-a1-m1-cA_3v2p-a1-m1-cE
2 3v2p-a1-m1-cA 45 45 1.0000 1.0000 1.0000 5.61e-27 3v2p-a1-m1-cA_3v2p-a1-m1-cE
3 3wfx-a1-m1-cA 136 30 0.2889 0.0956 0.4333 1.4 3wfx-a1-m1-cB_3wfx-a1-m1-cA
4 3wfx-a1-m1-cB 135 30 0.2889 0.0963 0.4333 1.5 3wfx-a1-m1-cB_3wfx-a1-m1-cA
5 3wfw-a1-m2-cA 138 30 0.2889 0.0942 0.4333 1.6 3wfw-a1-m1-cA_3wfw-a1-m2-cA
6 3wfw-a1-m1-cA 138 30 0.2889 0.0942 0.4333 1.6 3wfw-a1-m1-cA_3wfw-a1-m2-cA
7 3zs7-a1-m2-cA 277 24 0.2222 0.0361 0.4167 2.5 3zs7-a1-m1-cA_3zs7-a1-m2-cA
8 3zs7-a1-m1-cA 277 24 0.2222 0.0361 0.4167 2.5 3zs7-a1-m1-cA_3zs7-a1-m2-cA
9 6k0w-a2-m1-cA 528 20 0.1778 0.0152 0.4000 6.9 6k0w-a2-m1-cC_6k0w-a2-m1-cA
10 8hlz-a1-m1-cF 370 19 0.2000 0.0243 0.4737 8.4 8hlz-a1-m1-cC_8hlz-a1-m1-cF
11 8hlz-a1-m1-cC 370 19 0.2000 0.0243 0.4737 8.4 8hlz-a1-m1-cC_8hlz-a1-m1-cF
12 5j0i-a1-m3-cA 73 27 0.2444 0.1507 0.4074 9.7 5j0i-a1-m2-cA_5j0i-a1-m3-cA
13 5j0i-a1-m2-cA 73 27 0.2444 0.1507 0.4074 9.7 5j0i-a1-m2-cA_5j0i-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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