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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
MDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSRLSPEE
PAPETPEAPEAPGGSAV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1dip-a1-m1-cB 77 77 1.0000 1.0000 1.0000 7.56e-50 1dip-a1-m1-cA_1dip-a1-m1-cB
2 1dip-a1-m1-cA 77 77 1.0000 1.0000 1.0000 7.56e-50 1dip-a1-m1-cA_1dip-a1-m1-cB
3 5dol-a1-m2-cA 61 36 0.1818 0.2295 0.3889 1.8 5dol-a1-m2-cA_5dol-a1-m2-cB
4 5dol-a1-m1-cA 61 36 0.1818 0.2295 0.3889 1.8 5dol-a1-m1-cA_5dol-a1-m2-cB
5 5dol-a1-m2-cB 62 36 0.1818 0.2258 0.3889 1.9 5dol-a1-m1-cA_5dol-a1-m2-cB, 5dol-a1-m1-cB_5dol-a1-m2-cB, 5dol-a1-m2-cA_5dol-a1-m2-cB
6 5dol-a1-m1-cB 62 36 0.1818 0.2258 0.3889 1.9 5dol-a1-m1-cB_5dol-a1-m2-cB
7 3n6x-a2-m2-cA 439 58 0.1818 0.0319 0.2414 2.6 3n6x-a2-m1-cA_3n6x-a2-m2-cA
8 3n6x-a2-m1-cA 439 58 0.1818 0.0319 0.2414 2.6 3n6x-a2-m1-cA_3n6x-a2-m2-cA
9 4yqz-a1-m1-cD 229 40 0.1948 0.0655 0.3750 3.2 4yqz-a1-m1-cA_4yqz-a1-m1-cD, 4yqz-a1-m1-cC_4yqz-a1-m1-cD
10 4yqz-a1-m1-cC 229 40 0.1948 0.0655 0.3750 3.2 4yqz-a1-m1-cC_4yqz-a1-m1-cD
11 4yqz-a1-m1-cA 229 40 0.1948 0.0655 0.3750 3.2 4yqz-a1-m1-cA_4yqz-a1-m1-cD
12 4e40-a2-m2-cA 245 25 0.1299 0.0408 0.4000 3.5 4e40-a2-m1-cA_4e40-a2-m2-cA
13 4e40-a2-m1-cA 245 25 0.1299 0.0408 0.4000 3.5 4e40-a2-m1-cA_4e40-a2-m2-cA
14 2yy0-a3-m3-cD 53 44 0.2078 0.3019 0.3636 5.2 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
15 2yy0-a3-m2-cD 53 44 0.2078 0.3019 0.3636 5.2 2yy0-a3-m2-cD_2yy0-a3-m3-cD

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Reference:
Jacob Schwartz et al.

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