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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
MDMLFAKTVVLAASAVGAGTAMIAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLG
QAVAESTGIYSLVIALILLYANPFVGLLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wgm-a4-m1-cV 89 89 1.0000 1.0000 1.0000 6.78e-57 2wgm-a4-m1-cU_2wgm-a4-m1-cV
2 2wgm-a4-m1-cU 89 89 1.0000 1.0000 1.0000 6.78e-57 2wgm-a4-m1-cU_2wgm-a4-m1-cV
3 3zk2-a2-m1-cT 89 89 0.8315 0.8315 0.8315 1.52e-47 3zk2-a2-m1-cS_3zk2-a2-m1-cT
4 3zk2-a2-m1-cS 89 89 0.8315 0.8315 0.8315 1.52e-47 3zk2-a2-m1-cS_3zk2-a2-m1-cT
5 4bem-a1-m1-cI 81 75 0.5955 0.6543 0.7067 6.49e-34 4bem-a1-m1-cH_4bem-a1-m1-cI
6 4bem-a1-m1-cH 81 75 0.5955 0.6543 0.7067 6.49e-34 4bem-a1-m1-cH_4bem-a1-m1-cI
7 2xqu-a1-m3-cE 81 63 0.4382 0.4815 0.6190 3.87e-21 2xqu-a1-m3-cD_2xqu-a1-m3-cE
8 2xqu-a1-m3-cD 81 63 0.4382 0.4815 0.6190 3.87e-21 2xqu-a1-m3-cD_2xqu-a1-m3-cE
9 5fl7-a1-m1-cQ 76 73 0.3258 0.3816 0.3973 9.29e-12 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
10 5fl7-a1-m1-cP 75 73 0.3258 0.3867 0.3973 1.00e-11 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
11 4f4s-a2-m3-cO 74 72 0.2697 0.3243 0.3333 1.85e-09 4f4s-a2-m3-cN_4f4s-a2-m3-cO
12 4f4s-a2-m3-cN 74 72 0.2697 0.3243 0.3333 1.85e-09 4f4s-a2-m3-cN_4f4s-a2-m3-cO
13 2bl2-a1-m1-cI 156 57 0.2022 0.1154 0.3158 1.3 2bl2-a1-m1-cH_2bl2-a1-m1-cI
14 2bl2-a1-m1-cH 156 57 0.2022 0.1154 0.3158 1.3 2bl2-a1-m1-cH_2bl2-a1-m1-cI
15 6lx3-a1-m1-cB 206 50 0.1573 0.0680 0.2800 1.9 6lx3-a1-m1-cB_6lx3-a1-m1-cD
16 1ifv-a1-m1-cB 155 36 0.1573 0.0903 0.3889 2.2 1ifv-a1-m1-cA_1ifv-a1-m1-cB
17 1ifv-a1-m1-cA 155 36 0.1573 0.0903 0.3889 2.2 1ifv-a1-m1-cA_1ifv-a1-m1-cB
18 6xja-a1-m1-cB 210 40 0.1124 0.0476 0.2500 3.5 6xja-a1-m1-cA_6xja-a1-m1-cB
19 6ue7-a1-m1-cB 230 40 0.1124 0.0435 0.2500 3.6 6ue7-a1-m1-cG_6ue7-a1-m1-cB
20 6ue7-a1-m1-cG 223 40 0.1124 0.0448 0.2500 3.7 6ue7-a1-m1-cG_6ue7-a1-m1-cB
21 6xja-a1-m1-cA 209 40 0.1124 0.0478 0.2500 3.7 6xja-a1-m1-cA_6xja-a1-m1-cB
22 1ow0-a4-m1-cB 209 40 0.1124 0.0478 0.2500 3.7 1ow0-a4-m1-cA_1ow0-a4-m1-cB
23 1ow0-a4-m1-cA 209 40 0.1124 0.0478 0.2500 3.7 1ow0-a4-m1-cA_1ow0-a4-m1-cB

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Reference:
Jacob Schwartz et al.

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