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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MDNLVLIRMKPDNGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGR
DIAEHTHDQVVLFIKASELMLLVRPNAVESTV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2vph-a1-m1-cB 92 92 1.0000 1.0000 1.0000 4.30e-64 2vph-a1-m1-cB_2vph-a1-m1-cA
2 2vph-a1-m1-cA 98 98 0.9891 0.9286 0.9286 1.19e-58 2vph-a1-m1-cB_2vph-a1-m1-cA
3 3nfl-a5-m2-cD 89 89 0.9239 0.9551 0.9551 7.47e-55 3nfl-a5-m2-cD_3nfl-a5-m1-cA
4 3nfk-a3-m1-cB 91 90 0.9239 0.9341 0.9444 9.89e-55 3nfk-a3-m1-cB_3nfk-a3-m1-cA
5 3nfk-a3-m1-cA 92 92 0.9239 0.9239 0.9239 2.20e-54 3nfk-a3-m1-cB_3nfk-a3-m1-cA
6 3nfl-a5-m1-cA 92 91 0.9130 0.9130 0.9231 1.39e-53 3nfl-a5-m2-cD_3nfl-a5-m1-cA
7 2vrf-a6-m1-cD 95 78 0.3043 0.2947 0.3590 4.34e-12 2vrf-a6-m1-cC_2vrf-a6-m1-cD
8 2vrf-a6-m1-cC 95 78 0.3043 0.2947 0.3590 4.34e-12 2vrf-a6-m1-cC_2vrf-a6-m1-cD
9 8ah6-a1-m1-cB 102 60 0.2391 0.2157 0.3667 1.00e-06 8ah6-a1-m1-cA_8ah6-a1-m1-cB
10 8ah6-a1-m1-cA 101 60 0.2391 0.2178 0.3667 1.03e-06 8ah6-a1-m1-cA_8ah6-a1-m1-cB
11 1tp5-a2-m2-cA 115 60 0.2391 0.1913 0.3667 1.16e-06 1tp5-a2-m1-cA_1tp5-a2-m2-cA
12 1tp5-a2-m1-cA 115 60 0.2391 0.1913 0.3667 1.16e-06 1tp5-a2-m1-cA_1tp5-a2-m2-cA
13 5jxb-a1-m1-cC 119 60 0.2391 0.1849 0.3667 1.61e-06 5jxb-a1-m1-cA_5jxb-a1-m1-cC
14 5jxb-a1-m1-cA 117 60 0.2391 0.1880 0.3667 1.79e-06 5jxb-a1-m1-cA_5jxb-a1-m1-cC
15 2xkx-a1-m1-cB 718 60 0.2391 0.0306 0.3667 5.94e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
16 2xkx-a1-m1-cA 721 60 0.2391 0.0305 0.3667 5.94e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
17 3qe1-a1-m2-cA 102 97 0.3370 0.3039 0.3196 7.36e-06 3qe1-a1-m1-cA_3qe1-a1-m2-cA
18 3qe1-a1-m1-cA 102 97 0.3370 0.3039 0.3196 7.36e-06 3qe1-a1-m1-cA_3qe1-a1-m2-cA
19 2ego-a1-m1-cB 90 75 0.2935 0.3000 0.3600 8.65e-06 2ego-a1-m1-cA_2ego-a1-m1-cB
20 2ego-a1-m1-cA 88 73 0.2826 0.2955 0.3562 1.47e-05 2ego-a1-m1-cA_2ego-a1-m1-cB
21 7qsb-a1-m1-cA 84 80 0.3043 0.3333 0.3500 1.93e-05 7qsb-a1-m1-cB_7qsb-a1-m1-cA
22 5vwi-a1-m1-cB 87 81 0.2935 0.3103 0.3333 2.51e-05 5vwi-a1-m1-cB_5vwi-a1-m1-cA
23 3dj1-a3-m6-cB 110 88 0.3152 0.2636 0.3295 3.14e-05 3dj1-a3-m5-cB_3dj1-a3-m6-cB, 3dj1-a3-m6-cB_3dj1-a3-m1-cA
24 3dj1-a3-m5-cB 110 88 0.3152 0.2636 0.3295 3.14e-05 3dj1-a3-m5-cB_3dj1-a3-m6-cB
25 3qdo-a1-m2-cA 109 90 0.2935 0.2477 0.3000 9.25e-05 3qdo-a1-m1-cA_3qdo-a1-m2-cA
26 3qdo-a1-m1-cA 109 90 0.2935 0.2477 0.3000 9.25e-05 3qdo-a1-m1-cA_3qdo-a1-m2-cA
27 2fne-a4-m1-cB 100 78 0.2500 0.2300 0.2949 1.22e-04 2fne-a4-m1-cB_2fne-a4-m2-cC
28 3dj1-a3-m1-cA 115 92 0.3152 0.2522 0.3152 1.26e-04 3dj1-a3-m6-cB_3dj1-a3-m1-cA
29 2fne-a4-m2-cC 104 78 0.2500 0.2212 0.2949 1.26e-04 2fne-a4-m1-cB_2fne-a4-m2-cC
30 7qrt-a1-m1-cB 91 69 0.2500 0.2527 0.3333 1.73e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
31 7qrt-a1-m1-cA 92 69 0.2500 0.2500 0.3333 1.82e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
32 5vwi-a1-m1-cA 92 87 0.3043 0.3043 0.3218 2.90e-04 5vwi-a1-m1-cB_5vwi-a1-m1-cA
33 5tyt-a2-m1-cC 87 83 0.2717 0.2874 0.3012 3.73e-04 5tyt-a2-m1-cC_5tyt-a2-m2-cD
34 5tyt-a2-m2-cD 89 83 0.2717 0.2809 0.3012 3.86e-04 5tyt-a2-m1-cC_5tyt-a2-m2-cD
35 3r69-a3-m1-cA 85 71 0.2609 0.2824 0.3380 6.25e-04 3r69-a3-m1-cA_3r69-a3-m1-cB
36 7qsa-a1-m1-cB 78 73 0.2500 0.2949 0.3151 6.60e-04 7qsa-a1-m1-cB_7qsa-a1-m1-cA
37 7qsa-a1-m1-cA 85 74 0.2609 0.2824 0.3243 0.001 7qsa-a1-m1-cB_7qsa-a1-m1-cA
38 3r68-a2-m2-cA 85 81 0.2826 0.3059 0.3210 0.002 3r68-a2-m1-cA_3r68-a2-m2-cA
39 3r68-a2-m1-cA 85 81 0.2826 0.3059 0.3210 0.002 3r68-a2-m1-cA_3r68-a2-m2-cA
40 3r69-a3-m1-cB 87 81 0.2826 0.2989 0.3210 0.002 3r69-a3-m1-cA_3r69-a3-m1-cB
41 7mfw-a2-m2-cB 98 75 0.2065 0.1939 0.2533 0.004 7mfw-a2-m1-cA_7mfw-a2-m2-cB
42 7mfw-a1-m1-cB 98 75 0.2065 0.1939 0.2533 0.004 7mfw-a1-m1-cA_7mfw-a1-m1-cB
43 7mfw-a2-m1-cA 93 72 0.1957 0.1935 0.2500 0.006 7mfw-a2-m1-cA_7mfw-a2-m2-cB
44 7mfw-a1-m1-cA 93 72 0.1957 0.1935 0.2500 0.006 7mfw-a1-m1-cA_7mfw-a1-m1-cB
45 7qsb-a1-m1-cB 80 74 0.2717 0.3125 0.3378 0.007 7qsb-a1-m1-cB_7qsb-a1-m1-cA
46 2z17-a1-m2-cA 94 82 0.2391 0.2340 0.2683 0.009 2z17-a1-m1-cA_2z17-a1-m2-cA
47 2z17-a1-m1-cA 94 82 0.2391 0.2340 0.2683 0.009 2z17-a1-m1-cA_2z17-a1-m2-cA
48 6nek-a1-m2-cA 86 71 0.2174 0.2326 0.2817 0.019 6nek-a1-m1-cA_6nek-a1-m2-cA
49 6nek-a1-m1-cA 86 71 0.2174 0.2326 0.2817 0.019 6nek-a1-m1-cA_6nek-a1-m2-cA
50 1pdr-a1-m6-cA 96 47 0.1848 0.1771 0.3617 0.026 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
51 1pdr-a1-m5-cA 96 47 0.1848 0.1771 0.3617 0.026 1pdr-a1-m5-cA_1pdr-a1-m6-cA
52 1pdr-a1-m3-cA 96 47 0.1848 0.1771 0.3617 0.026 1pdr-a1-m3-cA_1pdr-a1-m6-cA
53 1pdr-a1-m2-cA 96 47 0.1848 0.1771 0.3617 0.026 1pdr-a1-m2-cA_1pdr-a1-m6-cA
54 5glj-a1-m1-cB 93 79 0.2391 0.2366 0.2785 0.032 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
55 5glj-a1-m1-cD 96 79 0.2391 0.2292 0.2785 0.034 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
56 5glj-a1-m1-cA 96 79 0.2391 0.2292 0.2785 0.034 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
57 1q3p-a2-m2-cA 98 94 0.2609 0.2449 0.2553 0.11 1q3p-a2-m1-cA_1q3p-a2-m2-cA, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
58 1q3p-a2-m1-cA 98 94 0.2609 0.2449 0.2553 0.11 1q3p-a2-m1-cA_1q3p-a2-m2-cA
59 2i04-a1-m1-cB 85 69 0.2065 0.2235 0.2754 0.12 2i04-a1-m1-cA_2i04-a1-m1-cB
60 2i04-a1-m1-cA 85 69 0.2065 0.2235 0.2754 0.12 2i04-a1-m1-cA_2i04-a1-m1-cB
61 1q3p-a2-m2-cB 103 94 0.2609 0.2330 0.2553 0.14 1q3p-a2-m1-cB_1q3p-a2-m2-cB, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
62 1q3p-a2-m1-cB 103 94 0.2609 0.2330 0.2553 0.14 1q3p-a2-m1-cB_1q3p-a2-m2-cB
63 4q2q-a1-m2-cA 90 72 0.2283 0.2333 0.2917 0.17 4q2q-a1-m1-cA_4q2q-a1-m2-cA
64 4q2q-a1-m1-cA 90 72 0.2283 0.2333 0.2917 0.17 4q2q-a1-m1-cA_4q2q-a1-m2-cA
65 2iwq-a1-m2-cA 92 62 0.1739 0.1739 0.2581 0.26 2iwq-a1-m1-cA_2iwq-a1-m2-cA
66 2iwq-a1-m1-cA 92 62 0.1739 0.1739 0.2581 0.26 2iwq-a1-m1-cA_2iwq-a1-m2-cA
67 3tsw-a5-m1-cB 194 72 0.2283 0.1082 0.2917 0.47 3tsw-a5-m1-cB_3tsw-a5-m1-cD
68 3tsw-a5-m1-cD 199 72 0.2283 0.1055 0.2917 0.47 3tsw-a5-m1-cB_3tsw-a5-m1-cD
69 3lny-a1-m6-cA 94 72 0.1957 0.1915 0.2500 0.53 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
70 3lny-a1-m5-cA 94 72 0.1957 0.1915 0.2500 0.53 3lny-a1-m5-cA_3lny-a1-m6-cA
71 3lny-a1-m3-cA 94 72 0.1957 0.1915 0.2500 0.53 3lny-a1-m3-cA_3lny-a1-m6-cA
72 7qcs-a1-m1-cB 98 34 0.1630 0.1531 0.4412 1.1 7qcs-a1-m1-cA_7qcs-a1-m1-cB
73 7qcs-a1-m1-cA 97 34 0.1630 0.1546 0.4412 1.1 7qcs-a1-m1-cA_7qcs-a1-m1-cB
74 2iwp-a1-m1-cA 92 63 0.1848 0.1848 0.2698 1.8 2iwp-a1-m1-cA_2iwp-a1-m1-cB
75 4amh-a1-m1-cB 92 82 0.2391 0.2391 0.2683 2.0 4amh-a1-m1-cB_4amh-a1-m1-cA
76 4amh-a1-m1-cA 94 82 0.2391 0.2340 0.2683 2.0 4amh-a1-m1-cB_4amh-a1-m1-cA
77 3ngh-a1-m2-cB 106 43 0.1630 0.1415 0.3488 2.1 3ngh-a1-m1-cA_3ngh-a1-m2-cB
78 3ngh-a1-m1-cA 106 43 0.1630 0.1415 0.3488 2.1 3ngh-a1-m1-cA_3ngh-a1-m2-cB
79 2iwp-a1-m1-cB 106 63 0.1848 0.1604 0.2698 2.5 2iwp-a1-m1-cA_2iwp-a1-m1-cB
80 2x7z-a1-m2-cA 99 65 0.1957 0.1818 0.2769 2.7 2x7z-a1-m1-cA_2x7z-a1-m2-cA
81 2x7z-a1-m1-cA 99 65 0.1957 0.1818 0.2769 2.7 2x7z-a1-m1-cA_2x7z-a1-m2-cA
82 3rl8-a1-m1-cC 95 65 0.1957 0.1895 0.2769 3.0 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
83 2p3w-a2-m3-cB 104 57 0.1630 0.1442 0.2632 3.3 2p3w-a2-m1-cB_2p3w-a2-m3-cB
84 2p3w-a2-m1-cB 104 57 0.1630 0.1442 0.2632 3.3 2p3w-a2-m1-cB_2p3w-a2-m3-cB
85 3rl8-a1-m1-cD 94 65 0.1957 0.1915 0.2769 3.4 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
86 3rl8-a1-m1-cA 94 65 0.1957 0.1915 0.2769 3.4 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
87 2w7r-a1-m1-cB 95 47 0.1848 0.1789 0.3617 3.5 2w7r-a1-m1-cA_2w7r-a1-m1-cB
88 2w7r-a1-m1-cA 95 47 0.1848 0.1789 0.3617 3.5 2w7r-a1-m1-cA_2w7r-a1-m1-cB
89 2x5s-a1-m1-cB 333 39 0.0978 0.0270 0.2308 3.6 2x5s-a1-m1-cA_2x5s-a1-m1-cB
90 2x5s-a1-m1-cA 333 39 0.0978 0.0270 0.2308 3.6 2x5s-a1-m1-cA_2x5s-a1-m1-cB
91 3rl8-a1-m1-cE 90 65 0.1957 0.2000 0.2769 3.7 3rl8-a1-m1-cE_3rl8-a1-m1-cD
92 3rl8-a1-m1-cB 90 65 0.1957 0.2000 0.2769 3.7 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
93 4zjs-a1-m1-cD 206 52 0.1848 0.0825 0.3269 3.7 4zjs-a1-m1-cA_4zjs-a1-m1-cD
94 4zjs-a1-m1-cA 206 52 0.1848 0.0825 0.3269 3.7 4zjs-a1-m1-cA_4zjs-a1-m1-cD
95 4q2p-a1-m1-cA 98 92 0.2500 0.2347 0.2500 4.1 4q2p-a1-m1-cB_4q2p-a1-m1-cA, 4q2p-a1-m1-cC_4q2p-a1-m1-cA
96 4q2p-a1-m1-cC 80 65 0.1739 0.2000 0.2462 4.2 4q2p-a1-m1-cC_4q2p-a1-m1-cA
97 7m4r-a1-m1-cA 360 33 0.1630 0.0417 0.4545 4.5 7m4r-a1-m1-cB_7m4r-a1-m1-cA
98 4q2p-a1-m1-cB 87 79 0.2065 0.2184 0.2405 5.1 4q2p-a1-m1-cB_4q2p-a1-m1-cA
99 3khf-a3-m1-cA 96 61 0.2065 0.1979 0.3115 6.1 3khf-a3-m1-cA_3khf-a3-m1-cB
100 3khf-a3-m1-cB 97 61 0.2065 0.1959 0.3115 6.5 3khf-a3-m1-cA_3khf-a3-m1-cB
101 5tr1-a1-m1-cB 606 57 0.1630 0.0248 0.2632 6.5 5tr1-a1-m1-cA_5tr1-a1-m1-cB
102 5tr1-a1-m1-cA 606 57 0.1630 0.0248 0.2632 6.5 5tr1-a1-m1-cA_5tr1-a1-m1-cB
103 2q5q-a1-m1-cA 533 62 0.2065 0.0356 0.3065 9.1 2q5q-a1-m1-cA_2q5q-a1-m2-cB
104 2q5q-a1-m2-cB 535 62 0.2065 0.0355 0.3065 9.2 2q5q-a1-m1-cA_2q5q-a1-m2-cB
105 2q5l-a2-m1-cB 535 20 0.1196 0.0206 0.5500 9.9 2q5l-a2-m1-cB_2q5l-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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