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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
MDPEFALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIR
IDSLSAQLSQLQKQLAACEAKLRDLEDSLARERDTSRRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7x5d-a1-m2-cA 99 99 1.0000 1.0000 1.0000 4.90e-66 7x5d-a1-m2-cB_7x5d-a1-m2-cA
2 7x5d-a1-m1-cA 99 99 1.0000 1.0000 1.0000 4.90e-66 7x5d-a1-m2-cB_7x5d-a1-m1-cA
3 7x5d-a1-m2-cB 94 94 0.9495 1.0000 1.0000 1.06e-60 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA
4 3v4q-a2-m2-cA 74 25 0.2323 0.3108 0.9200 6.91e-07 3v4q-a2-m1-cA_3v4q-a2-m2-cA
5 3v4q-a2-m1-cA 74 25 0.2323 0.3108 0.9200 6.91e-07 3v4q-a2-m1-cA_3v4q-a2-m2-cA
6 3tyy-a1-m1-cA 75 28 0.1414 0.1867 0.5000 0.080 3tyy-a1-m1-cB_3tyy-a1-m1-cA
7 3klt-a1-m1-cB 71 71 0.1919 0.2676 0.2676 0.22 3klt-a1-m1-cD_3klt-a1-m1-cB
8 3klt-a1-m1-cA 71 71 0.1919 0.2676 0.2676 0.22 3klt-a1-m1-cD_3klt-a1-m1-cA
9 3klt-a3-m1-cC 71 66 0.1818 0.2535 0.2727 0.22 3klt-a3-m1-cD_3klt-a3-m1-cC
10 3klt-a3-m1-cD 70 67 0.1818 0.2571 0.2687 0.26 3klt-a3-m1-cD_3klt-a3-m1-cC
11 3klt-a1-m1-cD 70 67 0.1818 0.2571 0.2687 0.26 3klt-a1-m1-cD_3klt-a1-m1-cA, 3klt-a1-m1-cD_3klt-a1-m1-cB
12 3tyy-a1-m1-cB 71 23 0.1212 0.1690 0.5217 0.28 3tyy-a1-m1-cB_3tyy-a1-m1-cA
13 2xzr-a1-m3-cA 108 61 0.1919 0.1759 0.3115 0.49 2xzr-a1-m2-cA_2xzr-a1-m3-cA
14 2xzr-a1-m2-cA 108 61 0.1919 0.1759 0.3115 0.49 2xzr-a1-m2-cA_2xzr-a1-m3-cA
15 1iy9-a1-m1-cD 274 70 0.1717 0.0620 0.2429 2.0 1iy9-a1-m1-cA_1iy9-a1-m1-cD, 1iy9-a1-m1-cC_1iy9-a1-m1-cD
16 1iy9-a1-m1-cC 274 70 0.1717 0.0620 0.2429 2.0 1iy9-a1-m1-cC_1iy9-a1-m1-cD
17 1iy9-a1-m1-cA 274 70 0.1717 0.0620 0.2429 2.0 1iy9-a1-m1-cA_1iy9-a1-m1-cD
18 7qy5-a1-m1-cB 320 37 0.1111 0.0344 0.2973 6.5 7qy5-a1-m1-cB_7qy5-a1-m1-cD
19 7qy5-a1-m1-cD 320 37 0.1111 0.0344 0.2973 7.1 7qy5-a1-m1-cB_7qy5-a1-m1-cD
20 3trt-a1-m1-cB 71 60 0.1616 0.2254 0.2667 7.3 3trt-a1-m1-cB_3trt-a1-m1-cA
21 4hl6-a3-m1-cE 374 36 0.1313 0.0348 0.3611 7.8 4hl6-a3-m1-cE_4hl6-a3-m1-cF
22 4hl6-a3-m1-cF 375 36 0.1313 0.0347 0.3611 7.8 4hl6-a3-m1-cE_4hl6-a3-m1-cF
23 3trt-a1-m1-cA 73 60 0.1616 0.2192 0.2667 7.8 3trt-a1-m1-cB_3trt-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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