Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4j8c-a1-m1-cB 44 44 1.0000 1.0000 1.0000 1.52e-27 4j8c-a1-m1-cA_4j8c-a1-m1-cB
2 4j8c-a1-m1-cA 44 44 1.0000 1.0000 1.0000 1.52e-27 4j8c-a1-m1-cA_4j8c-a1-m1-cB
3 7s7g-a1-m2-cA 571 17 0.2273 0.0175 0.5882 1.9 7s7g-a1-m1-cA_7s7g-a1-m2-cA
4 7s7g-a1-m1-cA 571 17 0.2273 0.0175 0.5882 1.9 7s7g-a1-m1-cA_7s7g-a1-m2-cA
5 6i1r-a1-m1-cA 309 22 0.2500 0.0356 0.5000 2.5 6i1r-a1-m1-cA_6i1r-a1-m1-cB
6 6i1r-a1-m1-cB 310 22 0.2500 0.0355 0.5000 2.5 6i1r-a1-m1-cA_6i1r-a1-m1-cB
7 3odm-a1-m1-cD 526 15 0.1818 0.0152 0.5333 5.5 3odm-a1-m1-cE_3odm-a1-m1-cD
8 3odm-a1-m1-cE 524 15 0.1818 0.0153 0.5333 5.6 3odm-a1-m1-cE_3odm-a1-m1-cD
9 3odm-a6-m1-cG 527 15 0.1818 0.0152 0.5333 5.6 3odm-a6-m1-cG_3odm-a6-m1-cF
10 3odm-a6-m1-cF 529 15 0.1818 0.0151 0.5333 5.6 3odm-a6-m1-cG_3odm-a6-m1-cF
11 4cn6-a1-m1-cB 649 18 0.2045 0.0139 0.5000 9.0 4cn6-a1-m1-cA_4cn6-a1-m1-cB
12 4cn6-a1-m1-cA 649 18 0.2045 0.0139 0.5000 9.0 4cn6-a1-m1-cA_4cn6-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600