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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MDTILLTGLFAAFFTTFAFAPQSIKTIRTRNTEGISVVMYIMFLTGVISWIAYGIMRSDF
AVLIANIVTLFLAAPVLVITLINRRKKHVLES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x5n-a2-m1-cC 92 92 1.0000 1.0000 1.0000 5.46e-62 4x5n-a2-m1-cD_4x5n-a2-m1-cC
2 4x5n-a2-m1-cD 91 91 0.9891 1.0000 1.0000 3.20e-61 4x5n-a2-m1-cD_4x5n-a2-m1-cC
3 4x5m-a1-m2-cA 86 86 0.9348 1.0000 1.0000 8.64e-57 4x5m-a1-m1-cA_4x5m-a1-m2-cA
4 4x5m-a1-m1-cA 86 86 0.9348 1.0000 1.0000 8.64e-57 4x5m-a1-m1-cA_4x5m-a1-m2-cA
5 4qnc-a1-m1-cA 81 72 0.3804 0.4321 0.4861 3.51e-19 4qnc-a1-m1-cA_4qnc-a1-m1-cB
6 4qnc-a1-m1-cB 82 72 0.3804 0.4268 0.4861 4.39e-19 4qnc-a1-m1-cA_4qnc-a1-m1-cB
7 5uhq-a2-m1-cD 81 72 0.3696 0.4198 0.4722 5.69e-18 5uhq-a2-m1-cC_5uhq-a2-m1-cD
8 5uhq-a2-m1-cC 80 72 0.3696 0.4250 0.4722 5.86e-18 5uhq-a2-m1-cC_5uhq-a2-m1-cD
9 4rng-a4-m2-cA 82 61 0.2174 0.2439 0.3279 1.62e-07 4rng-a4-m1-cE_4rng-a4-m2-cA, 4rng-a4-m1-cF_4rng-a4-m2-cA, 4rng-a4-m2-cA_4rng-a4-m2-cC
10 4rng-a4-m1-cF 82 61 0.2174 0.2439 0.3279 1.62e-07 4rng-a4-m1-cF_4rng-a4-m2-cA
11 4rng-a4-m1-cE 82 61 0.2174 0.2439 0.3279 1.62e-07 4rng-a4-m1-cE_4rng-a4-m2-cA
12 4rng-a4-m2-cC 83 61 0.2174 0.2410 0.3279 1.84e-07 4rng-a4-m2-cA_4rng-a4-m2-cC
13 3k7d-a3-m1-cB 495 61 0.1196 0.0222 0.1803 6.8 3k7d-a3-m1-cB_3k7d-a3-m1-cA
14 3k7d-a3-m1-cA 497 61 0.1196 0.0221 0.1803 6.8 3k7d-a3-m1-cB_3k7d-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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