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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAAKLTSDPT
DIPVVCLESDNGNIMIQKHDGITVAVHKMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3msh-a1-m2-cA 90 90 1.0000 1.0000 1.0000 2.21e-62 3msh-a1-m1-cA_3msh-a1-m2-cA
2 3msh-a1-m1-cA 90 90 1.0000 1.0000 1.0000 2.21e-62 3msh-a1-m1-cA_3msh-a1-m2-cA
3 7egq-a1-m1-cN 926 20 0.1333 0.0130 0.6000 0.80 7egq-a1-m1-cA_7egq-a1-m1-cN
4 7egq-a1-m1-cA 926 20 0.1333 0.0130 0.6000 0.80 7egq-a1-m1-cA_7egq-a1-m1-cN
5 7re3-a1-m1-cG 927 20 0.1333 0.0129 0.6000 0.80 7re3-a1-m1-cA_7re3-a1-m1-cG
6 7re3-a1-m1-cA 927 20 0.1333 0.0129 0.6000 0.80 7re3-a1-m1-cA_7re3-a1-m1-cG
7 1jc5-a3-m1-cE 145 50 0.1778 0.1103 0.3200 4.7 1jc5-a3-m1-cF_1jc5-a3-m1-cE
8 1jc5-a3-m1-cF 144 50 0.1778 0.1111 0.3200 4.9 1jc5-a3-m1-cF_1jc5-a3-m1-cE
9 8ck1-a1-m1-cF 206 18 0.1222 0.0534 0.6111 6.7 8ck1-a1-m1-cE_8ck1-a1-m1-cF
10 8ck1-a1-m1-cE 206 18 0.1222 0.0534 0.6111 6.7 8ck1-a1-m1-cE_8ck1-a1-m1-cF
11 3d8u-a1-m1-cA 260 14 0.0889 0.0308 0.5714 8.3 3d8u-a1-m1-cA_3d8u-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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