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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MEAVRAYELQLELQQIRTLRQSLELKMKELEYAEGIITSLKSERRIYRAFSDLLVEITKD
EAIEHIERSRLVYKREIEKLKKREKEIMEELSKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3aei-a2-m4-cB 94 94 1.0000 1.0000 1.0000 1.07e-58 3aei-a2-m2-cB_3aei-a2-m4-cB
2 3aei-a2-m2-cB 94 94 1.0000 1.0000 1.0000 1.07e-58 3aei-a2-m2-cB_3aei-a2-m4-cB
3 7q5b-a1-m1-cA 418 52 0.1489 0.0335 0.2692 0.96 7q5b-a1-m1-cA_7q5b-a1-m1-cB, 7q5b-a1-m1-cD_7q5b-a1-m1-cA
4 2zqm-a2-m8-cA 114 58 0.1702 0.1404 0.2759 1.2 2zqm-a2-m2-cA_2zqm-a2-m8-cA, 2zqm-a2-m3-cA_2zqm-a2-m8-cA, 2zqm-a2-m6-cA_2zqm-a2-m8-cA
5 2zqm-a2-m6-cA 114 58 0.1702 0.1404 0.2759 1.2 2zqm-a2-m6-cA_2zqm-a2-m8-cA
6 2zqm-a2-m3-cA 114 58 0.1702 0.1404 0.2759 1.2 2zqm-a2-m3-cA_2zqm-a2-m8-cA
7 2zqm-a2-m2-cA 114 58 0.1702 0.1404 0.2759 1.2 2zqm-a2-m2-cA_2zqm-a2-m8-cA
8 2zm5-a3-m1-cB 298 74 0.2553 0.0805 0.3243 1.8 2zm5-a3-m1-cB_2zm5-a3-m1-cA
9 2zm5-a3-m1-cA 299 74 0.2553 0.0803 0.3243 1.8 2zm5-a3-m1-cB_2zm5-a3-m1-cA
10 4z1d-a1-m1-cB 256 42 0.1277 0.0469 0.2857 1.9 4z1d-a1-m1-cA_4z1d-a1-m1-cB
11 4z1d-a1-m1-cA 256 42 0.1277 0.0469 0.2857 1.9 4z1d-a1-m1-cA_4z1d-a1-m1-cB
12 3qwu-a1-m1-cB 364 64 0.2553 0.0659 0.3750 2.2 3qwu-a1-m1-cB_3qwu-a1-m1-cA
13 3qwu-a1-m1-cA 366 64 0.2553 0.0656 0.3750 2.3 3qwu-a1-m1-cB_3qwu-a1-m1-cA
14 7q5b-a1-m1-cB 482 52 0.1489 0.0290 0.2692 2.6 7q5b-a1-m1-cA_7q5b-a1-m1-cB, 7q5b-a1-m1-cD_7q5b-a1-m1-cB
15 7q5b-a1-m1-cD 334 52 0.1489 0.0419 0.2692 3.7 7q5b-a1-m1-cD_7q5b-a1-m1-cA, 7q5b-a1-m1-cD_7q5b-a1-m1-cB
16 3kfb-a1-m2-cE 509 55 0.2234 0.0413 0.3818 3.9 3kfb-a1-m2-cD_3kfb-a1-m2-cE
17 3kfb-a1-m2-cD 509 55 0.2234 0.0413 0.3818 3.9 3kfb-a1-m2-cD_3kfb-a1-m2-cE
18 3izh-a1-m1-cP 513 55 0.2234 0.0409 0.3818 4.1 3izh-a1-m1-cB_3izh-a1-m1-cP, 3izh-a1-m1-cO_3izh-a1-m1-cP
19 3izh-a1-m1-cO 513 55 0.2234 0.0409 0.3818 4.1 3izh-a1-m1-cO_3izh-a1-m1-cP
20 3izh-a1-m1-cB 513 55 0.2234 0.0409 0.3818 4.1 3izh-a1-m1-cB_3izh-a1-m1-cP
21 3los-a1-m1-cP 532 55 0.2234 0.0395 0.3818 4.1 3los-a1-m1-cB_3los-a1-m1-cP
22 3los-a1-m1-cB 532 55 0.2234 0.0395 0.3818 4.1 3los-a1-m1-cB_3los-a1-m1-cP
23 2zdi-a1-m2-cB 106 58 0.1489 0.1321 0.2414 4.2 2zdi-a1-m1-cA_2zdi-a1-m2-cB
24 3ruv-a1-m4-cD 516 55 0.2234 0.0407 0.3818 4.2 3ruv-a1-m1-cD_3ruv-a1-m4-cD
25 3ruv-a1-m1-cD 516 55 0.2234 0.0407 0.3818 4.2 3ruv-a1-m1-cD_3ruv-a1-m4-cD
26 2zdi-a1-m1-cA 101 58 0.1489 0.1386 0.2414 5.3 2zdi-a1-m1-cA_2zdi-a1-m2-cB
27 5w74-a1-m2-cG 477 32 0.1702 0.0335 0.5000 6.5 5w74-a1-m1-cE_5w74-a1-m2-cG
28 5w74-a1-m2-cE 477 32 0.1702 0.0335 0.5000 6.5 5w74-a1-m2-cD_5w74-a1-m2-cE
29 5w74-a1-m2-cD 477 32 0.1702 0.0335 0.5000 6.5 5w74-a1-m2-cD_5w74-a1-m2-cE
30 5w74-a1-m1-cE 477 32 0.1702 0.0335 0.5000 6.5 5w74-a1-m1-cE_5w74-a1-m2-cG

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Reference:
Jacob Schwartz et al.

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