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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MEEAKQKVVDFLNSKSGSKSKFYFNDFTDLFPDMKQREVKKILTALVNDEVLEYWSSGST
TMYGLKGAGKQAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ucr-a1-m1-cB 75 74 1.0000 0.9867 1.0000 3.40e-50 1ucr-a1-m1-cA_1ucr-a1-m1-cB
2 1ucr-a1-m1-cA 74 74 1.0000 1.0000 1.0000 3.42e-50 1ucr-a1-m1-cA_1ucr-a1-m1-cB
3 3kzg-a1-m1-cD 220 24 0.1486 0.0500 0.4583 0.042 3kzg-a1-m1-cB_3kzg-a1-m1-cD, 3kzg-a1-m1-cC_3kzg-a1-m1-cD
4 3kzg-a1-m1-cC 220 24 0.1486 0.0500 0.4583 0.042 3kzg-a1-m1-cC_3kzg-a1-m1-cD
5 3kzg-a1-m1-cB 220 24 0.1486 0.0500 0.4583 0.042 3kzg-a1-m1-cA_3kzg-a1-m1-cB, 3kzg-a1-m1-cB_3kzg-a1-m1-cD
6 3kzg-a1-m1-cA 220 24 0.1486 0.0500 0.4583 0.042 3kzg-a1-m1-cA_3kzg-a1-m1-cB
7 2ghj-a5-m1-cA 99 64 0.2297 0.1717 0.2656 0.74 2ghj-a5-m1-cE_2ghj-a5-m1-cA
8 2ghj-a3-m1-cD 99 64 0.2297 0.1717 0.2656 0.74 2ghj-a3-m1-cA_2ghj-a3-m1-cD
9 2ghj-a3-m1-cA 99 64 0.2297 0.1717 0.2656 0.74 2ghj-a3-m1-cA_2ghj-a3-m1-cD
10 2ghj-a5-m1-cE 90 36 0.1757 0.1444 0.3611 0.85 2ghj-a5-m1-cE_2ghj-a5-m1-cA
11 2ghj-a3-m1-cE 90 36 0.1757 0.1444 0.3611 0.85 2ghj-a3-m1-cB_2ghj-a3-m1-cE
12 2ghj-a3-m1-cB 90 36 0.1757 0.1444 0.3611 0.85 2ghj-a3-m1-cB_2ghj-a3-m1-cE
13 6kr5-a1-m1-cB 336 56 0.2297 0.0506 0.3036 3.2 6kr5-a1-m1-cA_6kr5-a1-m1-cB
14 4k05-a3-m1-cB 372 26 0.1622 0.0323 0.4615 3.4 4k05-a3-m1-cA_4k05-a3-m1-cB
15 4k05-a3-m1-cA 372 26 0.1622 0.0323 0.4615 3.4 4k05-a3-m1-cA_4k05-a3-m1-cB
16 6kr5-a1-m1-cA 335 56 0.2297 0.0507 0.3036 3.4 6kr5-a1-m1-cA_6kr5-a1-m1-cB
17 2xot-a1-m1-cA 331 56 0.2027 0.0453 0.2679 4.3 2xot-a1-m1-cA_2xot-a1-m1-cB
18 2xot-a1-m1-cB 333 56 0.2027 0.0450 0.2679 4.7 2xot-a1-m1-cA_2xot-a1-m1-cB
19 6gdt-a2-m3-cB 566 30 0.1622 0.0212 0.4000 5.8 6gdt-a2-m1-cC_6gdt-a2-m3-cB
20 6gdt-a2-m1-cC 566 30 0.1622 0.0212 0.4000 5.8 6gdt-a2-m1-cC_6gdt-a2-m3-cB
21 8su6-a1-m1-cB 365 17 0.1216 0.0247 0.5294 6.1 8su6-a1-m1-cB_8su6-a1-m1-cA
22 8su6-a1-m1-cA 367 17 0.1216 0.0245 0.5294 6.1 8su6-a1-m1-cB_8su6-a1-m1-cA
23 4gho-a1-m2-cB 96 54 0.1892 0.1458 0.2593 6.4 4gho-a1-m1-cA_4gho-a1-m2-cB
24 4gho-a1-m1-cA 96 54 0.1892 0.1458 0.2593 6.4 4gho-a1-m1-cA_4gho-a1-m2-cB
25 1rge-a1-m1-cB 96 48 0.1757 0.1354 0.2708 6.9 1rge-a1-m1-cA_1rge-a1-m1-cB
26 1rge-a1-m1-cA 96 48 0.1757 0.1354 0.2708 6.9 1rge-a1-m1-cA_1rge-a1-m1-cB
27 1yke-a3-m1-cC 98 17 0.1351 0.1020 0.5882 7.7 1yke-a3-m1-cA_1yke-a3-m1-cC
28 1yke-a3-m1-cA 98 17 0.1351 0.1020 0.5882 7.7 1yke-a3-m1-cA_1yke-a3-m1-cC
29 3ia2-a2-m1-cF 271 41 0.1486 0.0406 0.2683 8.3 3ia2-a2-m1-cE_3ia2-a2-m1-cF
30 3ia2-a2-m1-cE 271 41 0.1486 0.0406 0.2683 8.3 3ia2-a2-m1-cE_3ia2-a2-m1-cF
31 2g3m-a1-m1-cF 692 48 0.1622 0.0173 0.2500 9.9 2g3m-a1-m1-cA_2g3m-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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