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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
MEERLARNALEASVEERTRDLRMARDRLETEIADHRQTTEKLQAVQQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4gkg-a1-m1-cA 52 47 1.0000 0.9038 1.0000 1.91e-26 4gkg-a1-m1-cF_4gkg-a1-m1-cA
2 4gkg-a1-m1-cF 47 47 1.0000 1.0000 1.0000 1.96e-26 4gkg-a1-m1-cF_4gkg-a1-m1-cA
3 2cwx-a2-m1-cE 408 23 0.2128 0.0245 0.4348 2.9 2cwx-a2-m1-cE_2cwx-a2-m1-cA
4 2cwx-a1-m4-cE 408 23 0.2128 0.0245 0.4348 2.9 2cwx-a1-m2-cE_2cwx-a1-m4-cE
5 2cwx-a1-m2-cE 408 23 0.2128 0.0245 0.4348 2.9 2cwx-a1-m2-cE_2cwx-a1-m4-cE
6 2cwx-a2-m1-cA 414 23 0.2128 0.0242 0.4348 3.2 2cwx-a2-m1-cE_2cwx-a2-m1-cA
7 2d69-a1-m2-cB 418 23 0.2128 0.0239 0.4348 3.2 2d69-a1-m2-cB_2d69-a1-m1-cA
8 2d69-a1-m1-cA 424 23 0.2128 0.0236 0.4348 3.4 2d69-a1-m2-cB_2d69-a1-m1-cA
9 5jxx-a1-m1-cC 257 29 0.2340 0.0428 0.3793 3.5 5jxx-a1-m1-cA_5jxx-a1-m1-cC
10 5jxx-a1-m1-cA 257 29 0.2340 0.0428 0.3793 3.5 5jxx-a1-m1-cA_5jxx-a1-m1-cC
11 4fzl-a3-m2-cA 239 28 0.2128 0.0418 0.3571 6.5 4fzl-a3-m2-cA_4fzl-a3-m1-cB
12 4fzl-a3-m1-cB 242 28 0.2128 0.0413 0.3571 6.5 4fzl-a3-m2-cA_4fzl-a3-m1-cB
13 4fzm-a2-m2-cA 276 28 0.2128 0.0362 0.3571 6.5 4fzm-a2-m1-cA_4fzm-a2-m2-cA
14 4fzm-a2-m1-cA 276 28 0.2128 0.0362 0.3571 6.5 4fzm-a2-m1-cA_4fzm-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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