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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
MEFMSAPANAVAADDATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGA
TDEWKGCQLFPGKLINVNGWSASWTLKAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1js2-a1-m1-cD 89 89 1.0000 1.0000 1.0000 1.31e-62 1js2-a1-m1-cA_1js2-a1-m1-cD
2 1js2-a1-m1-cC 89 89 1.0000 1.0000 1.0000 1.31e-62 1js2-a1-m1-cA_1js2-a1-m1-cC
3 1js2-a1-m1-cB 89 89 1.0000 1.0000 1.0000 1.31e-62 1js2-a1-m1-cA_1js2-a1-m1-cB
4 1js2-a1-m1-cA 89 89 1.0000 1.0000 1.0000 1.31e-62 1js2-a1-m1-cA_1js2-a1-m1-cB, 1js2-a1-m1-cA_1js2-a1-m1-cC, 1js2-a1-m1-cA_1js2-a1-m1-cD
5 1cku-a1-m1-cB 85 85 0.9438 0.9882 0.9882 6.46e-58 1cku-a1-m1-cA_1cku-a1-m1-cB
6 1cku-a1-m1-cA 85 85 0.9438 0.9882 0.9882 6.46e-58 1cku-a1-m1-cA_1cku-a1-m1-cB
7 3hip-a2-m1-cC 82 83 0.6854 0.7439 0.7349 6.62e-41 3hip-a2-m1-cB_3hip-a2-m1-cC
8 3hip-a1-m2-cA 82 83 0.6854 0.7439 0.7349 6.62e-41 3hip-a1-m1-cA_3hip-a1-m2-cA
9 3hip-a1-m1-cA 82 83 0.6854 0.7439 0.7349 6.62e-41 3hip-a1-m1-cA_3hip-a1-m2-cA
10 3hip-a2-m1-cB 80 81 0.6629 0.7375 0.7284 1.26e-39 3hip-a2-m1-cB_3hip-a2-m1-cC
11 1hlq-a1-m1-cB 74 78 0.2921 0.3514 0.3333 5.09e-06 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cB_1hlq-a1-m1-cC
12 1hlq-a1-m1-cA 75 78 0.2921 0.3467 0.3333 5.55e-06 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
13 1hlq-a1-m1-cC 74 77 0.2809 0.3378 0.3247 1.42e-05 1hlq-a1-m1-cB_1hlq-a1-m1-cC, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
14 7c8m-a1-m1-cC 128 17 0.1124 0.0781 0.5882 1.6 7c8m-a1-m1-cA_7c8m-a1-m1-cC
15 7c8m-a1-m1-cA 128 17 0.1124 0.0781 0.5882 1.6 7c8m-a1-m1-cA_7c8m-a1-m1-cC
16 3oa6-a1-m1-cB 84 30 0.1461 0.1548 0.4333 6.0 3oa6-a1-m1-cA_3oa6-a1-m1-cB
17 3oa6-a1-m1-cA 84 30 0.1461 0.1548 0.4333 6.0 3oa6-a1-m1-cA_3oa6-a1-m1-cB
18 4fi4-a2-m9-cC 403 34 0.1461 0.0323 0.3824 7.9 4fi4-a2-m1-cB_4fi4-a2-m9-cC, 4fi4-a2-m12-cC_4fi4-a2-m9-cC, 4fi4-a2-m3-cB_4fi4-a2-m9-cC
19 4fi4-a2-m3-cB 403 34 0.1461 0.0323 0.3824 7.9 4fi4-a2-m3-cB_4fi4-a2-m9-cC
20 4fi4-a2-m12-cC 403 34 0.1461 0.0323 0.3824 7.9 4fi4-a2-m12-cC_4fi4-a2-m9-cC
21 4fi4-a2-m1-cB 403 34 0.1461 0.0323 0.3824 7.9 4fi4-a2-m1-cB_4fi4-a2-m9-cC

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Reference:
Jacob Schwartz et al.

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