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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MEFWGIEIKPGKPFKVIGFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNLSQ
KFPQFSIDLYLGHEFEISHNSTSSVYLIGYRT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vmh-a1-m1-cD 92 92 1.0000 1.0000 1.0000 1.58e-64 7vmh-a1-m1-cD_7vmh-a1-m1-cB
2 7vmh-a1-m1-cB 96 95 1.0000 0.9583 0.9684 2.43e-62 7vmh-a1-m1-cD_7vmh-a1-m1-cB
3 7vrr-a1-m1-cA 94 97 0.4565 0.4468 0.4330 4.52e-18 7vrr-a1-m1-cB_7vrr-a1-m1-cA
4 7vrr-a1-m1-cB 92 97 0.4565 0.4565 0.4330 1.02e-17 7vrr-a1-m1-cB_7vrr-a1-m1-cA
5 7vmi-a1-m1-cD 96 96 0.4348 0.4167 0.4167 5.81e-16 7vmi-a1-m1-cB_7vmi-a1-m1-cD
6 7vmi-a1-m1-cB 96 96 0.4348 0.4167 0.4167 5.81e-16 7vmi-a1-m1-cB_7vmi-a1-m1-cD
7 7vmf-a1-m1-cE 95 97 0.4348 0.4211 0.4124 2.50e-14 7vmf-a1-m1-cD_7vmf-a1-m1-cE
8 7vmf-a1-m1-cD 95 97 0.4348 0.4211 0.4124 2.50e-14 7vmf-a1-m1-cD_7vmf-a1-m1-cE
9 6j2z-a1-m1-cF 82 27 0.1522 0.1707 0.5185 8.07e-04 6j2z-a1-m1-cF_6j2z-a1-m1-cH
10 7wim-a4-m1-cS 89 29 0.1630 0.1685 0.5172 0.003 7wim-a4-m1-cR_7wim-a4-m1-cS
11 6j2z-a2-m1-cC 96 95 0.2826 0.2708 0.2737 0.013 6j2z-a2-m1-cA_6j2z-a2-m1-cC
12 6j2z-a2-m1-cA 96 95 0.2826 0.2708 0.2737 0.013 6j2z-a2-m1-cA_6j2z-a2-m1-cC
13 6j2z-a1-m1-cH 96 95 0.2826 0.2708 0.2737 0.013 6j2z-a1-m1-cF_6j2z-a1-m1-cH
14 2rez-a1-m2-cA 155 30 0.1087 0.0645 0.3333 0.53 2rez-a1-m1-cA_2rez-a1-m2-cA
15 2rez-a1-m1-cA 155 30 0.1087 0.0645 0.3333 0.53 2rez-a1-m1-cA_2rez-a1-m2-cA
16 2nqm-a1-m1-cA 322 14 0.0978 0.0280 0.6429 1.2 2nqm-a1-m1-cA_2nqm-a1-m1-cB
17 2nqm-a1-m1-cB 403 14 0.0978 0.0223 0.6429 1.2 2nqm-a1-m1-cA_2nqm-a1-m1-cB
18 1g8r-a1-m1-cB 403 14 0.0978 0.0223 0.6429 1.2 1g8r-a1-m1-cA_1g8r-a1-m1-cB
19 1g8r-a1-m1-cA 403 14 0.0978 0.0223 0.6429 1.2 1g8r-a1-m1-cA_1g8r-a1-m1-cB
20 6ofd-a1-m1-cD 424 45 0.1848 0.0401 0.3778 2.0 6ofd-a1-m1-cD_6ofd-a1-m1-cB
21 6hwr-a2-m1-cA 424 45 0.1848 0.0401 0.3778 2.0 6hwr-a2-m1-cA_6hwr-a2-m1-cB
22 6ofd-a1-m1-cB 425 45 0.1848 0.0400 0.3778 2.1 6ofd-a1-m1-cD_6ofd-a1-m1-cB
23 6hwr-a2-m1-cB 425 45 0.1848 0.0400 0.3778 2.1 6hwr-a2-m1-cA_6hwr-a2-m1-cB
24 2h6e-a2-m4-cA 323 50 0.1848 0.0526 0.3400 3.7 2h6e-a2-m1-cA_2h6e-a2-m4-cA
25 2h6e-a2-m1-cA 323 50 0.1848 0.0526 0.3400 3.7 2h6e-a2-m1-cA_2h6e-a2-m4-cA
26 2h6e-a1-m4-cA 323 50 0.1848 0.0526 0.3400 3.7 2h6e-a1-m2-cA_2h6e-a1-m4-cA, 2h6e-a1-m3-cA_2h6e-a1-m4-cA
27 2h6e-a1-m3-cA 323 50 0.1848 0.0526 0.3400 3.7 2h6e-a1-m3-cA_2h6e-a1-m4-cA
28 2h6e-a1-m2-cA 323 50 0.1848 0.0526 0.3400 3.7 2h6e-a1-m2-cA_2h6e-a1-m4-cA
29 1ab8-a2-m2-cA 177 67 0.1522 0.0791 0.2090 9.7 1ab8-a2-m1-cA_1ab8-a2-m2-cA
30 1ab8-a2-m1-cA 177 67 0.1522 0.0791 0.2090 9.7 1ab8-a2-m1-cA_1ab8-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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