Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MEFWGIEIKPGKPFKVIQKDGFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGN
LSQKFPQFSIDLYLGHEFEISHNSTSSVYLIGYRTF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vmh-a1-m1-cB 96 96 1.0000 1.0000 1.0000 1.31e-67 7vmh-a1-m1-cD_7vmh-a1-m1-cB
2 7vmh-a1-m1-cD 92 95 0.9583 1.0000 0.9684 2.53e-62 7vmh-a1-m1-cD_7vmh-a1-m1-cB
3 7vrr-a1-m1-cA 94 97 0.4375 0.4468 0.4330 1.88e-20 7vrr-a1-m1-cB_7vrr-a1-m1-cA
4 7vrr-a1-m1-cB 92 97 0.4375 0.4565 0.4330 4.04e-20 7vrr-a1-m1-cB_7vrr-a1-m1-cA
5 7vmf-a1-m1-cE 95 97 0.4167 0.4211 0.4124 1.54e-16 7vmf-a1-m1-cD_7vmf-a1-m1-cE
6 7vmf-a1-m1-cD 95 97 0.4167 0.4211 0.4124 1.54e-16 7vmf-a1-m1-cD_7vmf-a1-m1-cE
7 7vmi-a1-m1-cD 96 96 0.4167 0.4167 0.4167 2.63e-16 7vmi-a1-m1-cB_7vmi-a1-m1-cD
8 7vmi-a1-m1-cB 96 96 0.4167 0.4167 0.4167 2.63e-16 7vmi-a1-m1-cB_7vmi-a1-m1-cD
9 7wim-a4-m1-cS 89 30 0.1562 0.1685 0.5000 0.001 7wim-a4-m1-cR_7wim-a4-m1-cS
10 6j2z-a2-m1-cC 96 98 0.2708 0.2708 0.2653 0.004 6j2z-a2-m1-cA_6j2z-a2-m1-cC
11 6j2z-a2-m1-cA 96 98 0.2708 0.2708 0.2653 0.004 6j2z-a2-m1-cA_6j2z-a2-m1-cC
12 6j2z-a1-m1-cH 96 98 0.2708 0.2708 0.2653 0.004 6j2z-a1-m1-cF_6j2z-a1-m1-cH
13 6j2z-a1-m1-cF 82 30 0.1562 0.1829 0.5000 0.004 6j2z-a1-m1-cF_6j2z-a1-m1-cH
14 8ep7-a2-m3-cB 312 50 0.1875 0.0577 0.3600 0.41 8ep7-a2-m1-cB_8ep7-a2-m3-cB
15 8ep7-a2-m1-cB 312 50 0.1875 0.0577 0.3600 0.41 8ep7-a2-m1-cB_8ep7-a2-m3-cB
16 5i2m-a1-m1-cC 408 30 0.1458 0.0343 0.4667 0.60 5i2m-a1-m1-cC_5i2m-a1-m1-cB
17 5i2m-a1-m1-cB 410 30 0.1458 0.0341 0.4667 0.62 5i2m-a1-m1-cC_5i2m-a1-m1-cB
18 5i2s-a1-m3-cA 413 30 0.1458 0.0339 0.4667 0.62 5i2s-a1-m2-cA_5i2s-a1-m3-cA
19 5i2s-a1-m2-cA 413 30 0.1458 0.0339 0.4667 0.62 5i2s-a1-m2-cA_5i2s-a1-m3-cA
20 2nqm-a1-m1-cA 322 14 0.0938 0.0280 0.6429 1.3 2nqm-a1-m1-cA_2nqm-a1-m1-cB
21 2nqm-a1-m1-cB 403 14 0.0938 0.0223 0.6429 1.4 2nqm-a1-m1-cA_2nqm-a1-m1-cB
22 1g8r-a1-m1-cB 403 14 0.0938 0.0223 0.6429 1.4 1g8r-a1-m1-cA_1g8r-a1-m1-cB
23 1g8r-a1-m1-cA 403 14 0.0938 0.0223 0.6429 1.4 1g8r-a1-m1-cA_1g8r-a1-m1-cB
24 6ofd-a1-m1-cB 425 45 0.1771 0.0400 0.3778 1.9 6ofd-a1-m1-cD_6ofd-a1-m1-cB
25 6hwr-a2-m1-cB 425 45 0.1771 0.0400 0.3778 1.9 6hwr-a2-m1-cA_6hwr-a2-m1-cB
26 6ofd-a1-m1-cD 424 45 0.1771 0.0401 0.3778 2.0 6ofd-a1-m1-cD_6ofd-a1-m1-cB
27 6hwr-a2-m1-cA 424 45 0.1771 0.0401 0.3778 2.0 6hwr-a2-m1-cA_6hwr-a2-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600