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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKKGEFVPLHVKVGNQNLVLGTLSTEN
IPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vrr-a1-m1-cA 94 94 1.0000 1.0000 1.0000 1.48e-65 7vrr-a1-m1-cB_7vrr-a1-m1-cA
2 7vrr-a1-m1-cB 92 93 0.9787 1.0000 0.9892 1.48e-61 7vrr-a1-m1-cB_7vrr-a1-m1-cA
3 7vmf-a1-m1-cE 95 96 0.5851 0.5789 0.5729 1.29e-31 7vmf-a1-m1-cD_7vmf-a1-m1-cE
4 7vmf-a1-m1-cD 95 96 0.5851 0.5789 0.5729 1.29e-31 7vmf-a1-m1-cD_7vmf-a1-m1-cE
5 7vmi-a1-m1-cD 96 93 0.5106 0.5000 0.5161 9.14e-29 7vmi-a1-m1-cB_7vmi-a1-m1-cD
6 7vmi-a1-m1-cB 96 93 0.5106 0.5000 0.5161 9.14e-29 7vmi-a1-m1-cB_7vmi-a1-m1-cD
7 7vmh-a1-m1-cB 96 97 0.4468 0.4375 0.4330 1.84e-20 7vmh-a1-m1-cD_7vmh-a1-m1-cB
8 7vmh-a1-m1-cD 92 97 0.4468 0.4565 0.4330 4.62e-18 7vmh-a1-m1-cD_7vmh-a1-m1-cB
9 6j2z-a2-m1-cC 96 92 0.3191 0.3125 0.3261 3.32e-05 6j2z-a2-m1-cA_6j2z-a2-m1-cC
10 6j2z-a2-m1-cA 96 92 0.3191 0.3125 0.3261 3.32e-05 6j2z-a2-m1-cA_6j2z-a2-m1-cC
11 6j2z-a1-m1-cH 96 92 0.3191 0.3125 0.3261 3.32e-05 6j2z-a1-m1-cF_6j2z-a1-m1-cH
12 6j2z-a1-m1-cF 82 30 0.1809 0.2073 0.5667 3.60e-04 6j2z-a1-m1-cF_6j2z-a1-m1-cH
13 7wim-a4-m1-cS 89 89 0.3085 0.3258 0.3258 0.003 7wim-a4-m1-cR_7wim-a4-m1-cS
14 4nav-a1-m2-cD 182 38 0.1596 0.0824 0.3947 2.2 4nav-a1-m2-cC_4nav-a1-m2-cD
15 4nav-a1-m2-cC 182 38 0.1596 0.0824 0.3947 2.2 4nav-a1-m2-cC_4nav-a1-m2-cD
16 3se7-a3-m1-cF 327 60 0.1596 0.0459 0.2500 4.8 3se7-a3-m1-cF_3se7-a3-m1-cE
17 3se7-a3-m1-cE 331 60 0.1596 0.0453 0.2500 5.0 3se7-a3-m1-cF_3se7-a3-m1-cE
18 3kkz-a3-m1-cB 245 45 0.1489 0.0571 0.3111 6.6 3kkz-a3-m1-cB_3kkz-a3-m1-cA
19 3kkz-a3-m1-cA 251 45 0.1489 0.0558 0.3111 7.0 3kkz-a3-m1-cB_3kkz-a3-m1-cA
20 4z80-a3-m2-cB 466 22 0.1170 0.0236 0.5000 7.5 4z80-a3-m1-cA_4z80-a3-m2-cB
21 4z80-a3-m1-cA 466 22 0.1170 0.0236 0.5000 7.5 4z80-a3-m1-cA_4z80-a3-m2-cB
22 2c7y-a1-m1-cA 391 32 0.1383 0.0332 0.4062 9.6 2c7y-a1-m1-cA_2c7y-a1-m1-cB
23 2c7y-a1-m1-cB 396 32 0.1383 0.0328 0.4062 9.6 2c7y-a1-m1-cA_2c7y-a1-m1-cB
24 2wu9-a1-m1-cB 402 32 0.1383 0.0323 0.4062 9.6 2wu9-a1-m1-cB_2wu9-a1-m1-cA
25 2wu9-a1-m1-cA 403 32 0.1383 0.0323 0.4062 9.6 2wu9-a1-m1-cB_2wu9-a1-m1-cA
26 6ap4-a4-m1-cG 378 21 0.1170 0.0291 0.5238 9.7 6ap4-a4-m1-cG_6ap4-a4-m1-cH
27 6ap4-a4-m1-cH 383 21 0.1170 0.0287 0.5238 9.7 6ap4-a4-m1-cG_6ap4-a4-m1-cH

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Reference:
Jacob Schwartz et al.

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