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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD
KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vmf-a1-m1-cE 95 95 1.0000 1.0000 1.0000 2.84e-66 7vmf-a1-m1-cD_7vmf-a1-m1-cE
2 7vmf-a1-m1-cD 95 95 1.0000 1.0000 1.0000 2.84e-66 7vmf-a1-m1-cD_7vmf-a1-m1-cE
3 7vrr-a1-m1-cA 94 96 0.5789 0.5851 0.5729 1.30e-31 7vrr-a1-m1-cB_7vrr-a1-m1-cA
4 7vrr-a1-m1-cB 92 94 0.5579 0.5761 0.5638 3.91e-30 7vrr-a1-m1-cB_7vrr-a1-m1-cA
5 7vmi-a1-m1-cD 96 93 0.4632 0.4583 0.4731 7.63e-22 7vmi-a1-m1-cB_7vmi-a1-m1-cD
6 7vmi-a1-m1-cB 96 93 0.4632 0.4583 0.4731 7.63e-22 7vmi-a1-m1-cB_7vmi-a1-m1-cD
7 7vmh-a1-m1-cB 96 97 0.4211 0.4167 0.4124 1.52e-16 7vmh-a1-m1-cD_7vmh-a1-m1-cB
8 7vmh-a1-m1-cD 92 97 0.4211 0.4348 0.4124 2.58e-14 7vmh-a1-m1-cD_7vmh-a1-m1-cB
9 6j2z-a2-m1-cC 96 94 0.2737 0.2708 0.2766 0.001 6j2z-a2-m1-cA_6j2z-a2-m1-cC
10 6j2z-a2-m1-cA 96 94 0.2737 0.2708 0.2766 0.001 6j2z-a2-m1-cA_6j2z-a2-m1-cC
11 6j2z-a1-m1-cH 96 94 0.2737 0.2708 0.2766 0.001 6j2z-a1-m1-cF_6j2z-a1-m1-cH
12 1v3t-a1-m1-cA 333 56 0.1684 0.0480 0.2857 3.0 1v3t-a1-m1-cB_1v3t-a1-m1-cA
13 1v3t-a1-m1-cB 330 56 0.1684 0.0485 0.2857 3.0 1v3t-a1-m1-cB_1v3t-a1-m1-cA
14 4rzk-a1-m1-cB 87 47 0.1789 0.1954 0.3617 3.0 4rzk-a1-m1-cA_4rzk-a1-m1-cB
15 4rzk-a1-m1-cA 87 47 0.1789 0.1954 0.3617 3.0 4rzk-a1-m1-cA_4rzk-a1-m1-cB
16 1nj8-a2-m1-cD 456 77 0.2105 0.0439 0.2597 9.6 1nj8-a2-m1-cC_1nj8-a2-m1-cD
17 1nj8-a2-m1-cC 456 77 0.2105 0.0439 0.2597 9.6 1nj8-a2-m1-cC_1nj8-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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