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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH
EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vmi-a1-m1-cD 96 96 1.0000 1.0000 1.0000 2.64e-67 7vmi-a1-m1-cB_7vmi-a1-m1-cD
2 7vmi-a1-m1-cB 96 96 1.0000 1.0000 1.0000 2.64e-67 7vmi-a1-m1-cB_7vmi-a1-m1-cD
3 7vrr-a1-m1-cA 94 93 0.5000 0.5106 0.5161 9.33e-29 7vrr-a1-m1-cB_7vrr-a1-m1-cA
4 7vrr-a1-m1-cB 92 93 0.5000 0.5217 0.5161 1.98e-28 7vrr-a1-m1-cB_7vrr-a1-m1-cA
5 7vmf-a1-m1-cE 95 93 0.4583 0.4632 0.4731 7.71e-22 7vmf-a1-m1-cD_7vmf-a1-m1-cE
6 7vmf-a1-m1-cD 95 93 0.4583 0.4632 0.4731 7.71e-22 7vmf-a1-m1-cD_7vmf-a1-m1-cE
7 7vmh-a1-m1-cB 96 96 0.4167 0.4167 0.4167 2.63e-16 7vmh-a1-m1-cD_7vmh-a1-m1-cB
8 7vmh-a1-m1-cD 92 96 0.4167 0.4348 0.4167 6.07e-16 7vmh-a1-m1-cD_7vmh-a1-m1-cB
9 6j2z-a1-m1-cF 82 52 0.1875 0.2195 0.3462 8.60e-04 6j2z-a1-m1-cF_6j2z-a1-m1-cH
10 7wim-a4-m1-cS 89 60 0.2396 0.2584 0.3833 0.003 7wim-a4-m1-cR_7wim-a4-m1-cS
11 6j2z-a2-m1-cC 96 58 0.2083 0.2083 0.3448 0.015 6j2z-a2-m1-cA_6j2z-a2-m1-cC
12 6j2z-a2-m1-cA 96 58 0.2083 0.2083 0.3448 0.015 6j2z-a2-m1-cA_6j2z-a2-m1-cC
13 6j2z-a1-m1-cH 96 58 0.2083 0.2083 0.3448 0.015 6j2z-a1-m1-cF_6j2z-a1-m1-cH
14 2bas-a1-m1-cB 387 21 0.1042 0.0258 0.4762 0.15 2bas-a1-m1-cB_2bas-a1-m1-cA
15 2bas-a1-m1-cA 393 21 0.1042 0.0254 0.4762 0.15 2bas-a1-m1-cB_2bas-a1-m1-cA
16 3twd-a3-m8-cB 222 33 0.1250 0.0541 0.3636 0.84 3twd-a3-m3-cA_3twd-a3-m8-cB
17 3twd-a3-m3-cA 222 33 0.1250 0.0541 0.3636 0.84 3twd-a3-m3-cA_3twd-a3-m8-cB
18 2oi6-a1-m3-cA 450 33 0.1250 0.0267 0.3636 1.9 2oi6-a1-m2-cA_2oi6-a1-m3-cA
19 2oi6-a1-m2-cA 450 33 0.1250 0.0267 0.3636 1.9 2oi6-a1-m2-cA_2oi6-a1-m3-cA
20 1hv9-a2-m3-cB 450 33 0.1250 0.0267 0.3636 1.9 1hv9-a2-m2-cB_1hv9-a2-m3-cB
21 1hv9-a2-m2-cB 450 33 0.1250 0.0267 0.3636 1.9 1hv9-a2-m2-cB_1hv9-a2-m3-cB
22 2yz1-a3-m1-cB 114 27 0.1146 0.0965 0.4074 2.6 2yz1-a3-m1-cA_2yz1-a3-m1-cB
23 2yz1-a3-m1-cA 114 27 0.1146 0.0965 0.4074 2.6 2yz1-a3-m1-cA_2yz1-a3-m1-cB
24 6ap4-a4-m1-cH 383 32 0.1146 0.0287 0.3438 2.7 6ap4-a4-m1-cG_6ap4-a4-m1-cH
25 6ap4-a4-m1-cG 378 32 0.1146 0.0291 0.3438 2.7 6ap4-a4-m1-cG_6ap4-a4-m1-cH
26 5e6t-a1-m1-cA 288 40 0.1250 0.0417 0.3000 8.1 5e6t-a1-m1-cB_5e6t-a1-m1-cA
27 5e6t-a1-m1-cB 284 40 0.1250 0.0423 0.3000 8.2 5e6t-a1-m1-cB_5e6t-a1-m1-cA
28 6k5v-a1-m1-cB 430 43 0.1667 0.0372 0.3721 8.2 6k5v-a1-m1-cB_6k5v-a1-m1-cA
29 6k5v-a1-m1-cA 433 43 0.1667 0.0370 0.3721 8.2 6k5v-a1-m1-cB_6k5v-a1-m1-cA
30 7mdi-a1-m1-cD 734 65 0.1875 0.0245 0.2769 8.6 7mdi-a1-m1-cC_7mdi-a1-m1-cD
31 7mdi-a1-m1-cC 734 65 0.1875 0.0245 0.2769 8.6 7mdi-a1-m1-cC_7mdi-a1-m1-cD
32 4a0o-a1-m1-cM 388 16 0.1042 0.0258 0.6250 9.4 4a0o-a1-m1-cM_4a0o-a1-m1-cO
33 7x0a-a1-m1-cb 446 16 0.1042 0.0224 0.6250 9.5 7x0a-a1-m1-cB_7x0a-a1-m1-cb
34 7wz3-a1-m1-cb 477 16 0.1042 0.0210 0.6250 9.6 7wz3-a1-m1-cB_7wz3-a1-m1-cb
35 4a0o-a1-m1-cO 481 16 0.1042 0.0208 0.6250 9.6 4a0o-a1-m1-cM_4a0o-a1-m1-cO
36 4a0o-a1-m1-cC 482 16 0.1042 0.0207 0.6250 9.6 4a0o-a1-m1-cA_4a0o-a1-m1-cC
37 4a0o-a1-m1-cF 488 16 0.1042 0.0205 0.6250 9.6 4a0o-a1-m1-cA_4a0o-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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