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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
MEIQFGNQRCRMVNSGGFLATDGSHLKEMETDDVLVEFLNIEHQLFIRNIRAIVKIADTT
VLPSASDKKLLYYVFDETRVRINDTPVIFS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4s3h-a2-m1-cD 90 90 1.0000 1.0000 1.0000 1.21e-63 4s3h-a2-m1-cC_4s3h-a2-m1-cD
2 4s3h-a2-m1-cC 90 90 1.0000 1.0000 1.0000 1.21e-63 4s3h-a2-m1-cC_4s3h-a2-m1-cD
3 5b37-a2-m1-cC 333 32 0.1222 0.0330 0.3438 1.2 5b37-a2-m1-cC_5b37-a2-m3-cF
4 5b37-a2-m3-cF 334 32 0.1222 0.0329 0.3438 1.2 5b37-a2-m1-cC_5b37-a2-m3-cF
5 3s2q-a2-m2-cB 65 35 0.1444 0.2000 0.3714 3.5 3s2q-a2-m1-cA_3s2q-a2-m2-cB, 3s2q-a2-m2-cA_3s2q-a2-m2-cB
6 3s2q-a2-m2-cA 65 35 0.1444 0.2000 0.3714 3.5 3s2q-a2-m2-cA_3s2q-a2-m2-cB
7 3s2q-a2-m1-cA 65 35 0.1444 0.2000 0.3714 3.5 3s2q-a2-m1-cA_3s2q-a2-m2-cB
8 1xv2-a2-m1-cC 228 52 0.2333 0.0921 0.4038 6.4 1xv2-a2-m1-cD_1xv2-a2-m1-cC
9 1xv2-a2-m1-cD 227 52 0.2333 0.0925 0.4038 6.6 1xv2-a2-m1-cD_1xv2-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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