Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
MEKVQYLTRSAIRRASTIEMPQQARQKLQNLFINFCLILICLLLICIIVMLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hyn-a1-m1-cE 52 52 1.0000 1.0000 1.0000 7.56e-31 2hyn-a1-m1-cD_2hyn-a1-m1-cE
2 2hyn-a1-m1-cD 52 52 1.0000 1.0000 1.0000 7.56e-31 2hyn-a1-m1-cD_2hyn-a1-m1-cE
3 2kyv-a1-m1-cE 52 52 0.9808 0.9808 0.9808 4.63e-30 2kyv-a1-m1-cD_2kyv-a1-m1-cE
4 2kyv-a1-m1-cD 52 52 0.9808 0.9808 0.9808 4.63e-30 2kyv-a1-m1-cD_2kyv-a1-m1-cE
5 2m3b-a1-m1-cE 51 52 0.9615 0.9804 0.9615 2.06e-27 2m3b-a1-m1-cD_2m3b-a1-m1-cE
6 2m3b-a1-m1-cD 51 52 0.9615 0.9804 0.9615 2.06e-27 2m3b-a1-m1-cD_2m3b-a1-m1-cE
7 1yod-a1-m2-cA 29 20 0.2885 0.5172 0.7500 0.002 1yod-a1-m2-cB_1yod-a1-m2-cA
8 1yod-a1-m1-cA 29 20 0.2885 0.5172 0.7500 0.002 1yod-a1-m2-cB_1yod-a1-m1-cA
9 4kyt-a3-m1-cB 29 16 0.2692 0.4828 0.8750 0.004 4kyt-a3-m1-cC_4kyt-a3-m1-cB
10 1yod-a1-m2-cB 26 17 0.2308 0.4615 0.7059 0.23 1yod-a1-m2-cB_1yod-a1-m1-cA, 1yod-a1-m2-cB_1yod-a1-m2-cA
11 4kyt-a3-m1-cC 15 15 0.2308 0.8000 0.8000 1.7 4kyt-a3-m1-cC_4kyt-a3-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600