Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=52)
MEKVQYLTRSAIRRASTIEMPQQARQNLQNLFINFCLILICLLLICIIVMLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2kyv-a1-m1-cE 52 52 1.0000 1.0000 1.0000 7.00e-31 2kyv-a1-m1-cD_2kyv-a1-m1-cE
2 2kyv-a1-m1-cD 52 52 1.0000 1.0000 1.0000 7.00e-31 2kyv-a1-m1-cD_2kyv-a1-m1-cE
3 2hyn-a1-m1-cE 52 52 0.9808 0.9808 0.9808 4.63e-30 2hyn-a1-m1-cD_2hyn-a1-m1-cE
4 2hyn-a1-m1-cD 52 52 0.9808 0.9808 0.9808 4.63e-30 2hyn-a1-m1-cD_2hyn-a1-m1-cE
5 2m3b-a1-m1-cE 51 52 0.9808 1.0000 0.9808 3.36e-28 2m3b-a1-m1-cD_2m3b-a1-m1-cE
6 2m3b-a1-m1-cD 51 52 0.9808 1.0000 0.9808 3.36e-28 2m3b-a1-m1-cD_2m3b-a1-m1-cE
7 1yod-a1-m2-cA 29 20 0.3077 0.5517 0.8000 2.52e-04 1yod-a1-m2-cB_1yod-a1-m2-cA
8 1yod-a1-m1-cA 29 20 0.3077 0.5517 0.8000 2.52e-04 1yod-a1-m2-cB_1yod-a1-m1-cA
9 4kyt-a3-m1-cB 29 16 0.2692 0.4828 0.8750 0.006 4kyt-a3-m1-cC_4kyt-a3-m1-cB
10 1yod-a1-m2-cB 26 17 0.2500 0.5000 0.7647 0.035 1yod-a1-m2-cB_1yod-a1-m1-cA, 1yod-a1-m2-cB_1yod-a1-m2-cA
11 4kyt-a3-m1-cC 15 15 0.2308 0.8000 0.8000 2.9 4kyt-a3-m1-cC_4kyt-a3-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600