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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
MEKVQYLTRSAIRRATIEMPQQARQNLQNLFINFCLILICLLLICIIVMLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2m3b-a1-m1-cE 51 51 1.0000 1.0000 1.0000 5.23e-30 2m3b-a1-m1-cD_2m3b-a1-m1-cE
2 2m3b-a1-m1-cD 51 51 1.0000 1.0000 1.0000 5.23e-30 2m3b-a1-m1-cD_2m3b-a1-m1-cE
3 2kyv-a1-m1-cE 52 52 1.0000 0.9808 0.9808 3.30e-28 2kyv-a1-m1-cD_2kyv-a1-m1-cE
4 2kyv-a1-m1-cD 52 52 1.0000 0.9808 0.9808 3.30e-28 2kyv-a1-m1-cD_2kyv-a1-m1-cE
5 2hyn-a1-m1-cE 52 52 0.9804 0.9615 0.9615 2.02e-27 2hyn-a1-m1-cD_2hyn-a1-m1-cE
6 2hyn-a1-m1-cD 52 52 0.9804 0.9615 0.9615 2.02e-27 2hyn-a1-m1-cD_2hyn-a1-m1-cE
7 1yod-a1-m2-cA 29 20 0.3137 0.5517 0.8000 2.47e-04 1yod-a1-m2-cB_1yod-a1-m2-cA
8 1yod-a1-m1-cA 29 20 0.3137 0.5517 0.8000 2.47e-04 1yod-a1-m2-cB_1yod-a1-m1-cA
9 4kyt-a3-m1-cB 29 16 0.2745 0.4828 0.8750 0.006 4kyt-a3-m1-cC_4kyt-a3-m1-cB
10 1yod-a1-m2-cB 26 17 0.2549 0.5000 0.7647 0.035 1yod-a1-m2-cB_1yod-a1-m1-cA, 1yod-a1-m2-cB_1yod-a1-m2-cA
11 4kyt-a3-m1-cC 15 15 0.2353 0.8000 0.8000 2.9 4kyt-a3-m1-cC_4kyt-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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