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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
MELKNSISDYTEAEFVQLLKEIEKENVAATDDVLDVLLEHFVKITEHPDGTDLIYYPSDN
RDDSPEGIVKEIKEWRAANGKPGFKQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1unk-a1-m1-cD 87 87 1.0000 1.0000 1.0000 1.26e-60 1unk-a1-m1-cA_1unk-a1-m1-cD, 1unk-a1-m1-cB_1unk-a1-m1-cD
2 1unk-a1-m1-cC 87 87 1.0000 1.0000 1.0000 1.26e-60 1unk-a1-m1-cA_1unk-a1-m1-cC
3 1unk-a1-m1-cB 87 87 1.0000 1.0000 1.0000 1.26e-60 1unk-a1-m1-cB_1unk-a1-m1-cD
4 1unk-a1-m1-cA 87 87 1.0000 1.0000 1.0000 1.26e-60 1unk-a1-m1-cA_1unk-a1-m1-cC, 1unk-a1-m1-cA_1unk-a1-m1-cD
5 2jb0-a1-m4-cA 84 84 0.9655 1.0000 1.0000 4.95e-58 2jb0-a1-m2-cA_2jb0-a1-m4-cA, 2jb0-a1-m3-cA_2jb0-a1-m4-cA
6 2jb0-a1-m3-cA 84 84 0.9655 1.0000 1.0000 4.95e-58 2jb0-a1-m3-cA_2jb0-a1-m4-cA
7 2jb0-a1-m2-cA 84 84 0.9655 1.0000 1.0000 4.95e-58 2jb0-a1-m2-cA_2jb0-a1-m4-cA
8 2pjr-a1-m1-cA 542 75 0.2299 0.0369 0.2667 3.0 2pjr-a1-m1-cA_2pjr-a1-m1-cF
9 2pjr-a1-m1-cF 544 75 0.2299 0.0368 0.2667 3.0 2pjr-a1-m1-cA_2pjr-a1-m1-cF
10 4jqy-a1-m1-cB 205 39 0.1494 0.0634 0.3333 3.2 4jqy-a1-m1-cA_4jqy-a1-m1-cB
11 4jqy-a1-m1-cA 194 39 0.1494 0.0670 0.3333 3.5 4jqy-a1-m1-cA_4jqy-a1-m1-cB
12 6qav-a2-m1-cC 275 41 0.1609 0.0509 0.3415 4.2 6qav-a2-m1-cD_6qav-a2-m1-cC
13 7cs6-a2-m1-cB 289 53 0.2184 0.0657 0.3585 4.4 7cs6-a2-m1-cB_7cs6-a2-m1-cF
14 6yid-a1-m1-cB 264 41 0.1609 0.0530 0.3415 4.6 6yid-a1-m1-cA_6yid-a1-m1-cB
15 6yid-a1-m1-cA 259 41 0.1609 0.0541 0.3415 4.8 6yid-a1-m1-cA_6yid-a1-m1-cB
16 6qav-a2-m1-cD 254 41 0.1609 0.0551 0.3415 5.0 6qav-a2-m1-cD_6qav-a2-m1-cC
17 5o1p-a1-m2-cA 442 53 0.1954 0.0385 0.3208 6.0 5o1p-a1-m1-cA_5o1p-a1-m2-cA
18 5o1p-a1-m1-cA 442 53 0.1954 0.0385 0.3208 6.0 5o1p-a1-m1-cA_5o1p-a1-m2-cA
19 6cwq-a1-m1-cA 308 38 0.1264 0.0357 0.2895 6.9 6cwq-a1-m1-cB_6cwq-a1-m1-cA
20 6cwq-a1-m1-cB 302 38 0.1264 0.0364 0.2895 7.6 6cwq-a1-m1-cB_6cwq-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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