Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MEMDIRFRGDDLEALLKAAIEMIKQALKFGATITLSLDGNDLEIRITGVPEQVRKELAKE
AERLAKEFGITVTRTIRGSWSLEHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4pww-a1-m2-cA 85 85 1.0000 1.0000 1.0000 2.23e-57 4pww-a1-m1-cA_4pww-a1-m2-cA
2 4pww-a1-m1-cA 85 85 1.0000 1.0000 1.0000 2.23e-57 4pww-a1-m1-cA_4pww-a1-m2-cA
3 6zv9-a1-m1-cA 166 73 0.8118 0.4157 0.9452 6.48e-42 6zv9-a1-m1-cA_6zv9-a1-m1-cB
4 6zv9-a1-m1-cB 169 73 0.8118 0.4083 0.9452 7.31e-42 6zv9-a1-m1-cA_6zv9-a1-m1-cB
5 4rjv-a2-m1-cD 83 85 0.7647 0.7831 0.7647 4.97e-40 4rjv-a2-m1-cC_4rjv-a2-m1-cD
6 4rjv-a2-m1-cC 79 79 0.7176 0.7722 0.7722 3.90e-38 4rjv-a2-m1-cC_4rjv-a2-m1-cD
7 4ney-a1-m1-cA 163 82 0.6353 0.3313 0.6585 1.62e-23 4ney-a1-m1-cA_4ney-a1-m1-cB
8 4ney-a1-m1-cA 163 74 0.5765 0.3006 0.6622 3.84e-21 4ney-a1-m1-cA_4ney-a1-m1-cB
9 4nez-a1-m2-cA 152 78 0.6000 0.3355 0.6538 6.16e-23 4nez-a1-m1-cA_4nez-a1-m2-cA
10 4nez-a1-m2-cA 152 74 0.5647 0.3158 0.6486 4.61e-21 4nez-a1-m1-cA_4nez-a1-m2-cA
11 4nez-a1-m1-cA 152 78 0.6000 0.3355 0.6538 6.16e-23 4nez-a1-m1-cA_4nez-a1-m2-cA
12 4nez-a1-m1-cA 152 74 0.5647 0.3158 0.6486 4.61e-21 4nez-a1-m1-cA_4nez-a1-m2-cA
13 4ney-a1-m1-cB 164 74 0.5765 0.2988 0.6622 5.55e-21 4ney-a1-m1-cA_4ney-a1-m1-cB
14 4ney-a1-m1-cB 164 74 0.5765 0.2988 0.6622 5.55e-21 4ney-a1-m1-cA_4ney-a1-m1-cB
15 6sm4-a1-m1-cB 77 48 0.1529 0.1688 0.2708 0.034 6sm4-a1-m1-cB_6sm4-a1-m1-cA
16 6sm4-a1-m1-cA 78 48 0.1529 0.1667 0.2708 0.036 6sm4-a1-m1-cB_6sm4-a1-m1-cA
17 3tr2-a1-m1-cB 214 65 0.2706 0.1075 0.3538 0.92 3tr2-a1-m1-cA_3tr2-a1-m1-cB
18 3tr2-a1-m1-cA 212 65 0.2706 0.1085 0.3538 0.94 3tr2-a1-m1-cA_3tr2-a1-m1-cB
19 7xdu-a1-m1-cB 348 26 0.1529 0.0374 0.5000 1.7 7xdu-a1-m1-cA_7xdu-a1-m1-cB
20 7xdu-a1-m1-cA 346 26 0.1529 0.0376 0.5000 1.8 7xdu-a1-m1-cA_7xdu-a1-m1-cB
21 3etc-a1-m1-cA 531 27 0.1412 0.0226 0.4444 4.0 3etc-a1-m1-cA_3etc-a1-m1-cB
22 3etc-a1-m1-cB 537 27 0.1412 0.0223 0.4444 4.0 3etc-a1-m1-cA_3etc-a1-m1-cB
23 5lp3-a1-m1-cL 376 63 0.2118 0.0479 0.2857 7.0 5lp3-a1-m1-cD_5lp3-a1-m1-cL

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600