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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
MEMGQLKNKIENKKKELIQLVARHGLDHDKVLLFSRDLDKLINKFMNVKDKVHKLEHHHH
HH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2bzb-a1-m1-cB 62 62 1.0000 1.0000 1.0000 2.05e-37 2bzb-a1-m1-cA_2bzb-a1-m1-cB
2 2bzb-a1-m1-cA 62 62 1.0000 1.0000 1.0000 2.05e-37 2bzb-a1-m1-cA_2bzb-a1-m1-cB
3 6iog-a1-m1-cB 374 56 0.3065 0.0508 0.3393 0.057 6iog-a1-m1-cA_6iog-a1-m1-cB
4 4xbf-a1-m4-cA 666 48 0.2258 0.0210 0.2917 0.34 4xbf-a1-m2-cA_4xbf-a1-m4-cA, 4xbf-a1-m3-cA_4xbf-a1-m4-cA
5 4xbf-a1-m3-cA 666 48 0.2258 0.0210 0.2917 0.34 4xbf-a1-m3-cA_4xbf-a1-m4-cA
6 4xbf-a1-m2-cA 666 48 0.2258 0.0210 0.2917 0.34 4xbf-a1-m2-cA_4xbf-a1-m4-cA
7 3ipo-a2-m1-cA 410 39 0.2258 0.0341 0.3590 0.76 3ipo-a2-m1-cA_3ipo-a2-m1-cB
8 3ipo-a2-m1-cB 415 39 0.2258 0.0337 0.3590 0.76 3ipo-a2-m1-cA_3ipo-a2-m1-cB
9 2rhs-a1-m1-cD 785 41 0.1613 0.0127 0.2439 0.92 2rhs-a1-m1-cD_2rhs-a1-m1-cB
10 2rhs-a1-m1-cB 786 39 0.1613 0.0127 0.2564 1.5 2rhs-a1-m1-cD_2rhs-a1-m1-cB
11 8h0t-a1-m2-cA 184 28 0.2258 0.0761 0.5000 1.7 8h0t-a1-m1-cA_8h0t-a1-m2-cA
12 8h0t-a1-m1-cA 184 28 0.2258 0.0761 0.5000 1.7 8h0t-a1-m1-cA_8h0t-a1-m2-cA
13 4ic6-a1-m2-cC 335 56 0.2581 0.0478 0.2857 1.8 4ic6-a1-m2-cC_4ic6-a1-m2-cA
14 4ic6-a1-m2-cA 340 56 0.2581 0.0471 0.2857 1.8 4ic6-a1-m2-cC_4ic6-a1-m2-cA
15 4ic6-a1-m1-cA 340 56 0.2581 0.0471 0.2857 1.8 4ic6-a1-m2-cB_4ic6-a1-m1-cA
16 4nav-a1-m2-cD 182 32 0.1935 0.0659 0.3750 1.9 4nav-a1-m2-cC_4nav-a1-m2-cD
17 4nav-a1-m2-cC 182 32 0.1935 0.0659 0.3750 1.9 4nav-a1-m2-cC_4nav-a1-m2-cD
18 2c9o-a1-m6-cA 398 36 0.2097 0.0327 0.3611 2.9 2c9o-a1-m5-cA_2c9o-a1-m6-cA
19 2c9o-a1-m5-cA 398 36 0.2097 0.0327 0.3611 2.9 2c9o-a1-m5-cA_2c9o-a1-m6-cA
20 6z68-a1-m1-cA 363 9 0.1129 0.0193 0.7778 3.8 6z68-a1-m1-cB_6z68-a1-m1-cA
21 6tj8-a1-m1-cB 667 15 0.1452 0.0135 0.6000 5.2 6tj8-a1-m1-cA_6tj8-a1-m1-cB
22 4ha7-a1-m1-cA 221 28 0.1452 0.0407 0.3214 6.6 4ha7-a1-m1-cB_4ha7-a1-m1-cA
23 8c9t-a2-m1-cC 228 11 0.1290 0.0351 0.7273 6.7 8c9t-a2-m1-cB_8c9t-a2-m1-cC
24 4ha7-a1-m1-cB 205 28 0.1452 0.0439 0.3214 8.3 4ha7-a1-m1-cB_4ha7-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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