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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
MEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVD
NASLARLDLERKVESLQEEIAFLKKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5whf-a1-m2-cG 88 86 1.0000 0.9773 1.0000 1.47e-53 5whf-a1-m2-cD_5whf-a1-m2-cG, 5whf-a1-m2-cH_5whf-a1-m2-cG
2 5whf-a1-m2-cE 86 86 1.0000 1.0000 1.0000 1.71e-53 5whf-a1-m2-cH_5whf-a1-m2-cE
3 5whf-a1-m2-cD 85 85 0.9884 1.0000 1.0000 1.35e-52 5whf-a1-m2-cD_5whf-a1-m2-cG
4 5whf-a1-m2-cH 84 84 0.9767 1.0000 1.0000 4.74e-52 5whf-a1-m2-cH_5whf-a1-m2-cE, 5whf-a1-m2-cH_5whf-a1-m2-cG
5 4ypc-a1-m3-cA 83 77 0.8953 0.9277 1.0000 1.82e-47 4ypc-a1-m2-cA_4ypc-a1-m3-cA
6 4ypc-a1-m2-cA 83 77 0.8953 0.9277 1.0000 1.82e-47 4ypc-a1-m2-cA_4ypc-a1-m3-cA
7 3uf1-a2-m1-cD 108 85 0.9535 0.7593 0.9647 2.28e-46 3uf1-a2-m1-cC_3uf1-a2-m1-cD
8 3uf1-a2-m1-cC 105 85 0.9535 0.7810 0.9647 2.80e-46 3uf1-a2-m1-cC_3uf1-a2-m1-cD
9 4yv3-a1-m1-cA 75 76 0.8605 0.9867 0.9737 3.60e-41 4yv3-a1-m1-cC_4yv3-a1-m1-cA
10 4yv3-a1-m1-cC 61 62 0.6977 0.9836 0.9677 5.14e-31 4yv3-a1-m1-cC_4yv3-a1-m1-cA
11 6a9p-a1-m1-cH 101 85 0.6163 0.5248 0.6235 5.24e-29 6a9p-a1-m1-cH_6a9p-a1-m1-cA
12 6a9p-a2-m1-cF 100 85 0.6163 0.5300 0.6235 5.62e-29 6a9p-a2-m1-cF_6a9p-a2-m1-cE
13 6a9p-a2-m1-cC 104 85 0.6163 0.5096 0.6235 6.65e-29 6a9p-a2-m1-cE_6a9p-a2-m1-cC
14 6a9p-a2-m1-cE 102 85 0.6163 0.5196 0.6235 6.93e-29 6a9p-a2-m1-cE_6a9p-a2-m1-cC, 6a9p-a2-m1-cF_6a9p-a2-m1-cE
15 6a9p-a1-m1-cA 103 85 0.6163 0.5146 0.6235 7.37e-29 6a9p-a1-m1-cH_6a9p-a1-m1-cA
16 3s4r-a1-m1-cB 91 37 0.4302 0.4066 1.0000 3.99e-18 3s4r-a1-m1-cA_3s4r-a1-m1-cB
17 3s4r-a1-m1-cA 88 37 0.4302 0.4205 1.0000 4.30e-18 3s4r-a1-m1-cA_3s4r-a1-m1-cB
18 6e2j-a2-m4-cA 107 84 0.3721 0.2991 0.3810 5.88e-14 6e2j-a2-m1-cA_6e2j-a2-m4-cA, 6e2j-a2-m2-cA_6e2j-a2-m4-cA, 6e2j-a2-m3-cA_6e2j-a2-m4-cA
19 6e2j-a2-m3-cA 107 84 0.3721 0.2991 0.3810 5.88e-14 6e2j-a2-m3-cA_6e2j-a2-m4-cA
20 6e2j-a2-m2-cA 107 84 0.3721 0.2991 0.3810 5.88e-14 6e2j-a2-m2-cA_6e2j-a2-m4-cA
21 6e2j-a2-m1-cA 107 84 0.3721 0.2991 0.3810 5.88e-14 6e2j-a2-m1-cA_6e2j-a2-m4-cA
22 6e2j-a2-m4-cB 104 83 0.3721 0.3077 0.3855 6.72e-09 6e2j-a2-m2-cB_6e2j-a2-m4-cB
23 6e2j-a2-m4-cB 104 41 0.1744 0.1442 0.3659 1.0 6e2j-a2-m2-cB_6e2j-a2-m4-cB
24 6e2j-a2-m2-cB 104 83 0.3721 0.3077 0.3855 6.72e-09 6e2j-a2-m2-cB_6e2j-a2-m4-cB
25 6e2j-a2-m2-cB 104 41 0.1744 0.1442 0.3659 1.0 6e2j-a2-m2-cB_6e2j-a2-m4-cB
26 4qqw-a5-m1-cA 911 48 0.1860 0.0176 0.3333 1.9 4qqw-a5-m1-cC_4qqw-a5-m1-cA
27 4qqw-a5-m1-cC 902 48 0.1860 0.0177 0.3333 2.1 4qqw-a5-m1-cC_4qqw-a5-m1-cA
28 1n9w-a1-m1-cA 356 59 0.2674 0.0646 0.3898 2.3 1n9w-a1-m1-cA_1n9w-a1-m1-cB
29 1n9w-a1-m1-cB 359 59 0.2674 0.0641 0.3898 2.4 1n9w-a1-m1-cA_1n9w-a1-m1-cB
30 4ihs-a3-m1-cC 90 29 0.1163 0.1111 0.3448 3.7 4ihs-a3-m1-cA_4ihs-a3-m1-cC
31 4ihs-a3-m1-cA 89 29 0.1163 0.1124 0.3448 3.8 4ihs-a3-m1-cA_4ihs-a3-m1-cC
32 2d8d-a1-m1-cA 80 75 0.2674 0.2875 0.3067 4.2 2d8d-a1-m1-cA_2d8d-a1-m1-cB
33 2d8d-a1-m1-cB 83 75 0.2674 0.2771 0.3067 5.0 2d8d-a1-m1-cA_2d8d-a1-m1-cB
34 6mi3-a1-m1-cB 124 44 0.2326 0.1613 0.4545 5.8 6mi3-a1-m1-cA_6mi3-a1-m1-cB
35 6mi3-a1-m1-cA 122 44 0.2326 0.1639 0.4545 5.8 6mi3-a1-m1-cA_6mi3-a1-m1-cB
36 3k1m-a4-m1-cA 300 29 0.1163 0.0333 0.3448 6.9 3k1m-a4-m1-cA_3k1m-a4-m3-cB
37 3k1m-a2-m2-cA 300 29 0.1163 0.0333 0.3448 6.9 3k1m-a2-m1-cA_3k1m-a2-m2-cA
38 3k1m-a2-m1-cA 300 29 0.1163 0.0333 0.3448 6.9 3k1m-a2-m1-cA_3k1m-a2-m2-cA, 3k1m-a2-m1-cA_3k1m-a2-m4-cB
39 3k1m-a1-m1-cA 300 29 0.1163 0.0333 0.3448 6.9 3k1m-a1-m1-cA_3k1m-a1-m1-cB
40 4kvs-a2-m2-cA 221 27 0.1047 0.0407 0.3333 7.2 4kvs-a2-m1-cA_4kvs-a2-m2-cA
41 4kvs-a2-m1-cA 221 27 0.1047 0.0407 0.3333 7.2 4kvs-a2-m1-cA_4kvs-a2-m2-cA
42 7eyw-a2-m3-cD 252 58 0.1628 0.0556 0.2414 9.1 7eyw-a2-m3-cD_7eyw-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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