Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
MENLIGYVAAFLTTVSFLPAVLRVVMTKQTRDISRNMYIMFFLGVVLWFVYGILRSDLPI
ILANVVTLFFVTIILYYKLT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5uhq-a2-m1-cD 81 80 1.0000 0.9877 1.0000 4.02e-52 5uhq-a2-m1-cC_5uhq-a2-m1-cD
2 5uhq-a2-m1-cC 80 80 1.0000 1.0000 1.0000 5.31e-52 5uhq-a2-m1-cC_5uhq-a2-m1-cD
3 4qnc-a1-m1-cA 81 80 0.9875 0.9753 0.9875 2.25e-51 4qnc-a1-m1-cA_4qnc-a1-m1-cB
4 4qnc-a1-m1-cB 82 80 0.9875 0.9634 0.9875 2.89e-51 4qnc-a1-m1-cA_4qnc-a1-m1-cB
5 4rng-a4-m2-cA 82 64 0.3500 0.3415 0.4375 4.42e-16 4rng-a4-m1-cE_4rng-a4-m2-cA, 4rng-a4-m1-cF_4rng-a4-m2-cA, 4rng-a4-m2-cA_4rng-a4-m2-cC
6 4rng-a4-m1-cF 82 64 0.3500 0.3415 0.4375 4.42e-16 4rng-a4-m1-cF_4rng-a4-m2-cA
7 4rng-a4-m1-cE 82 64 0.3500 0.3415 0.4375 4.42e-16 4rng-a4-m1-cE_4rng-a4-m2-cA
8 4rng-a4-m2-cC 83 64 0.3500 0.3373 0.4375 4.90e-16 4rng-a4-m2-cA_4rng-a4-m2-cC
9 4x5n-a2-m1-cC 92 57 0.3250 0.2826 0.4561 3.98e-13 4x5n-a2-m1-cD_4x5n-a2-m1-cC
10 4x5n-a2-m1-cD 91 57 0.3250 0.2857 0.4561 4.10e-13 4x5n-a2-m1-cD_4x5n-a2-m1-cC
11 4x5m-a1-m2-cA 86 57 0.3250 0.3023 0.4561 4.24e-13 4x5m-a1-m1-cA_4x5m-a1-m2-cA
12 4x5m-a1-m1-cA 86 57 0.3250 0.3023 0.4561 4.24e-13 4x5m-a1-m1-cA_4x5m-a1-m2-cA
13 3fai-a2-m2-cA 227 45 0.2000 0.0705 0.3556 1.2 3fai-a2-m1-cA_3fai-a2-m2-cA
14 3fai-a2-m1-cA 227 45 0.2000 0.0705 0.3556 1.2 3fai-a2-m1-cA_3fai-a2-m2-cA
15 2scp-a1-m1-cB 174 25 0.1375 0.0632 0.4400 2.5 2scp-a1-m1-cA_2scp-a1-m1-cB
16 2scp-a1-m1-cA 174 25 0.1375 0.0632 0.4400 2.5 2scp-a1-m1-cA_2scp-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600