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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MENLIGYVAAFLTTVSFLPQVLRVVMTKQTRDISRNMYIMFFLGVVLWFVYGILRSDLPI
ILANVVTLFFVTIILYYKLTEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qnc-a1-m1-cB 82 82 1.0000 1.0000 1.0000 4.01e-54 4qnc-a1-m1-cA_4qnc-a1-m1-cB
2 4qnc-a1-m1-cA 81 81 0.9878 1.0000 1.0000 3.42e-53 4qnc-a1-m1-cA_4qnc-a1-m1-cB
3 5uhq-a2-m1-cD 81 81 0.9756 0.9877 0.9877 3.55e-52 5uhq-a2-m1-cC_5uhq-a2-m1-cD
4 5uhq-a2-m1-cC 80 80 0.9634 0.9875 0.9875 2.97e-51 5uhq-a2-m1-cC_5uhq-a2-m1-cD
5 4rng-a4-m2-cC 83 64 0.3537 0.3494 0.4531 3.05e-17 4rng-a4-m2-cA_4rng-a4-m2-cC
6 4rng-a4-m2-cA 82 64 0.3537 0.3537 0.4531 3.39e-17 4rng-a4-m1-cE_4rng-a4-m2-cA, 4rng-a4-m1-cF_4rng-a4-m2-cA, 4rng-a4-m2-cA_4rng-a4-m2-cC
7 4rng-a4-m1-cF 82 64 0.3537 0.3537 0.4531 3.39e-17 4rng-a4-m1-cF_4rng-a4-m2-cA
8 4rng-a4-m1-cE 82 64 0.3537 0.3537 0.4531 3.39e-17 4rng-a4-m1-cE_4rng-a4-m2-cA
9 4x5n-a2-m1-cC 92 57 0.3293 0.2935 0.4737 3.35e-14 4x5n-a2-m1-cD_4x5n-a2-m1-cC
10 4x5n-a2-m1-cD 91 57 0.3293 0.2967 0.4737 3.73e-14 4x5n-a2-m1-cD_4x5n-a2-m1-cC
11 4x5m-a1-m2-cA 86 57 0.3293 0.3140 0.4737 3.88e-14 4x5m-a1-m1-cA_4x5m-a1-m2-cA
12 4x5m-a1-m1-cA 86 57 0.3293 0.3140 0.4737 3.88e-14 4x5m-a1-m1-cA_4x5m-a1-m2-cA
13 3fai-a2-m2-cA 227 45 0.1951 0.0705 0.3556 1.3 3fai-a2-m1-cA_3fai-a2-m2-cA
14 3fai-a2-m1-cA 227 45 0.1951 0.0705 0.3556 1.3 3fai-a2-m1-cA_3fai-a2-m2-cA
15 2scp-a1-m1-cB 174 25 0.1341 0.0632 0.4400 3.5 2scp-a1-m1-cA_2scp-a1-m1-cB
16 2scp-a1-m1-cA 174 25 0.1341 0.0632 0.4400 3.5 2scp-a1-m1-cA_2scp-a1-m1-cB
17 4qnd-a2-m3-cA 97 61 0.1585 0.1340 0.2131 5.2 4qnd-a2-m1-cA_4qnd-a2-m3-cA
18 4qnd-a2-m1-cA 97 61 0.1585 0.1340 0.2131 5.2 4qnd-a2-m1-cA_4qnd-a2-m3-cA
19 4qnd-a1-m2-cA 97 61 0.1585 0.1340 0.2131 5.2 4qnd-a1-m1-cA_4qnd-a1-m2-cA
20 4qnd-a1-m1-cA 97 61 0.1585 0.1340 0.2131 5.2 4qnd-a1-m1-cA_4qnd-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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