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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
MENLVVYNDGADQRAAEYLADRLACPTINNARKFDYSNVKNVYAVGGNKEQYTSYLTTLI
AGSTRYTTMQAVLDYIKNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5a6s-a1-m2-cB 79 79 1.0000 1.0000 1.0000 5.79e-54 5a6s-a1-m2-cB_5a6s-a1-m2-cA
2 5a6s-a1-m2-cA 273 79 0.9873 0.2857 0.9873 4.33e-51 5a6s-a1-m1-cA_5a6s-a1-m2-cA, 5a6s-a1-m2-cB_5a6s-a1-m2-cA
3 5a6s-a1-m1-cA 273 79 0.9873 0.2857 0.9873 4.33e-51 5a6s-a1-m1-cA_5a6s-a1-m2-cA
4 7wkq-a2-m1-cC 194 33 0.1646 0.0670 0.3939 0.073 7wkq-a2-m1-cC_7wkq-a2-m2-cD
5 1e5d-a1-m1-cB 401 45 0.1772 0.0349 0.3111 1.3 1e5d-a1-m1-cA_1e5d-a1-m1-cB
6 1e5d-a1-m1-cA 401 45 0.1772 0.0349 0.3111 1.3 1e5d-a1-m1-cA_1e5d-a1-m1-cB
7 6lvo-a1-m3-cA 237 22 0.1519 0.0506 0.5455 5.1 6lvo-a1-m2-cA_6lvo-a1-m3-cA
8 6lvo-a1-m2-cA 237 22 0.1519 0.0506 0.5455 5.1 6lvo-a1-m2-cA_6lvo-a1-m3-cA
9 6nag-a1-m1-cA 351 37 0.1646 0.0370 0.3514 5.7 6nag-a1-m1-cB_6nag-a1-m1-cA
10 5vdn-a1-m1-cB 449 16 0.1266 0.0223 0.6250 7.7 5vdn-a1-m1-cA_5vdn-a1-m1-cB
11 5vdn-a1-m1-cA 449 16 0.1266 0.0223 0.6250 7.7 5vdn-a1-m1-cA_5vdn-a1-m1-cB
12 3bby-a1-m2-cA 188 23 0.1392 0.0585 0.4783 8.4 3bby-a1-m1-cA_3bby-a1-m2-cA
13 3bby-a1-m1-cA 188 23 0.1392 0.0585 0.4783 8.4 3bby-a1-m1-cA_3bby-a1-m2-cA
14 3jvv-a1-m1-cA 331 23 0.1392 0.0332 0.4783 8.9 3jvv-a1-m1-cA_3jvv-a1-m2-cC
15 3jvv-a1-m2-cC 337 23 0.1392 0.0326 0.4783 8.9 3jvv-a1-m1-cA_3jvv-a1-m2-cC
16 2qih-a2-m5-cB 137 23 0.1013 0.0584 0.3478 9.3 2qih-a2-m4-cB_2qih-a2-m5-cB
17 2qih-a2-m4-cB 137 23 0.1013 0.0584 0.3478 9.3 2qih-a2-m4-cB_2qih-a2-m5-cB
18 4kam-a3-m1-cD 368 19 0.1392 0.0299 0.5789 9.4 4kam-a3-m1-cD_4kam-a3-m1-cC
19 4kam-a1-m1-cD 368 19 0.1392 0.0299 0.5789 9.4 4kam-a1-m1-cD_4kam-a1-m1-cB
20 4kam-a1-m1-cB 381 19 0.1392 0.0289 0.5789 9.4 4kam-a1-m1-cB_4kam-a1-m1-cC, 4kam-a1-m1-cD_4kam-a1-m1-cB
21 4kam-a3-m1-cC 383 19 0.1392 0.0287 0.5789 9.4 4kam-a3-m1-cD_4kam-a3-m1-cC
22 4kam-a1-m1-cC 383 19 0.1392 0.0287 0.5789 9.4 4kam-a1-m1-cB_4kam-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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