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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI
EDQGYDVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qif-a1-m1-cB 68 68 1.0000 1.0000 1.0000 1.87e-43 2qif-a1-m1-cB_2qif-a1-m1-cA
2 3i9z-a1-m3-cA 69 68 1.0000 0.9855 1.0000 1.94e-43 3i9z-a1-m2-cA_3i9z-a1-m3-cA
3 3i9z-a1-m2-cA 69 68 1.0000 0.9855 1.0000 1.94e-43 3i9z-a1-m2-cA_3i9z-a1-m3-cA
4 2qif-a1-m1-cA 69 68 1.0000 0.9855 1.0000 1.94e-43 2qif-a1-m1-cB_2qif-a1-m1-cA
5 6ff2-a1-m1-cB 67 65 0.5441 0.5522 0.5692 6.72e-21 6ff2-a1-m1-cA_6ff2-a1-m1-cB
6 6ff2-a1-m1-cA 67 65 0.5441 0.5522 0.5692 6.72e-21 6ff2-a1-m1-cA_6ff2-a1-m1-cB
7 3j09-a1-m1-cB 723 65 0.4118 0.0387 0.4308 5.46e-12 3j09-a1-m1-cA_3j09-a1-m1-cB
8 3j09-a1-m1-cA 723 65 0.4118 0.0387 0.4308 5.46e-12 3j09-a1-m1-cA_3j09-a1-m1-cB
9 6a72-a1-m2-cB 72 61 0.2794 0.2639 0.3115 6.23e-09 6a72-a1-m1-cA_6a72-a1-m2-cB
10 6a71-a1-m1-cA 72 61 0.2794 0.2639 0.3115 6.23e-09 6a71-a1-m1-cB_6a71-a1-m1-cA
11 6a72-a1-m1-cA 71 61 0.2794 0.2676 0.3115 6.29e-09 6a72-a1-m1-cA_6a72-a1-m2-cB
12 6a71-a1-m1-cB 71 61 0.2794 0.2676 0.3115 6.29e-09 6a71-a1-m1-cB_6a71-a1-m1-cA
13 3fry-a1-m1-cB 72 26 0.1471 0.1389 0.3846 0.40 3fry-a1-m1-cB_3fry-a1-m1-cA
14 3fry-a1-m1-cA 73 26 0.1471 0.1370 0.3846 0.44 3fry-a1-m1-cB_3fry-a1-m1-cA
15 5f0u-a1-m2-cA 65 60 0.2206 0.2308 0.2500 0.73 5f0u-a1-m1-cA_5f0u-a1-m2-cA
16 5f0u-a1-m1-cA 65 60 0.2206 0.2308 0.2500 0.73 5f0u-a1-m1-cA_5f0u-a1-m2-cA
17 6v05-a1-m1-cA 758 33 0.1912 0.0172 0.3939 2.1 6v05-a1-m1-cF_6v05-a1-m1-cA
18 2awa-a2-m1-cD 374 30 0.1912 0.0348 0.4333 3.5 2awa-a2-m1-cC_2awa-a2-m1-cD
19 2awa-a2-m1-cC 374 30 0.1912 0.0348 0.4333 3.5 2awa-a2-m1-cC_2awa-a2-m1-cD
20 2ft0-a1-m1-cB 222 35 0.1618 0.0495 0.3143 5.6 2ft0-a1-m1-cA_2ft0-a1-m1-cB
21 2ft0-a1-m1-cA 222 35 0.1618 0.0495 0.3143 5.6 2ft0-a1-m1-cA_2ft0-a1-m1-cB
22 3nqw-a1-m1-cB 178 60 0.2206 0.0843 0.2500 6.6 3nqw-a1-m1-cA_3nqw-a1-m1-cB
23 3nqw-a1-m1-cA 178 60 0.2206 0.0843 0.2500 6.6 3nqw-a1-m1-cA_3nqw-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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